Pairwise Alignments

Query, 377 a.a., efflux RND transporter periplasmic adaptor subunit from Vibrio cholerae E7946 ATCC 55056

Subject, 385 a.a., RND family efflux transporter, MFP subunit from Echinicola vietnamensis KMM 6221, DSM 17526

 Score = 73.6 bits (179), Expect = 9e-18
 Identities = 53/202 (26%), Positives = 92/202 (45%), Gaps = 23/202 (11%)

Query: 32  PLPTLNVSRGTIEKQAVAVGQIMPSHSVAIKSQINGIVGEIYVREGQHVEQGQPLIKVRP 91
           PLP +++      +    +G I    +V I+ Q++GI+ +IYV EG  VE+GQPL K+  
Sbjct: 41  PLPVISLKEEKAARSYQYLGSIEGVENVEIRPQVDGILEQIYVDEGDFVEKGQPLFKINS 100

Query: 92  NPTPQALTDASTELMQSEANLESDLQRLANLERLVKQQII-----PANYDDYVRAKADVK 146
            P  + L +A   +   +A L      +  L+ L+  ++I          DY  AK+ ++
Sbjct: 101 QPYMEDLKNAQANVELEKAKLRKAKTEIDRLQPLIDNEVISEVRMQTTLADYEVAKSALQ 160

Query: 147 AKQAEVQQKRQNLELIRSGEASIGQAKLSSTLYAPISGTILNIKVEVGEPIISTESSQAA 206
             +A     R NLE               +T+ AP++G +  I   +G  +  T+S    
Sbjct: 161 QAEAVAANMRINLEF--------------TTIKAPVNGFMGRIPRSIGNVVKKTDSEPLT 206

Query: 207 TEMIQLADMKNIVFKGSVSEHD 228
           T    L+++  +    S+SE D
Sbjct: 207 T----LSNVHEVYVYFSMSESD 224