Pairwise Alignments

Query, 377 a.a., efflux RND transporter periplasmic adaptor subunit from Vibrio cholerae E7946 ATCC 55056

Subject, 371 a.a., macrolide transporter membrane fusion protein (MFP) component from Escherichia coli BL21

 Score = 85.1 bits (209), Expect = 3e-21
 Identities = 93/381 (24%), Positives = 166/381 (43%), Gaps = 44/381 (11%)

Query: 3   KRWTLLATLVGVGLAGGYYTLTYTPESSSPLPT---LNVSRGTIEKQAVAVGQIMPSHSV 59
           KR+ +   +V  GL      +T     ++P+PT   L V  G +++  +A G++     V
Sbjct: 9   KRYVIALVIVIAGL------ITLWRILNAPVPTYQTLIVRPGDLQQSVLATGKLDALRKV 62

Query: 60  AIKSQINGIVGEIYVREGQHVEQGQPLIKVRPNPTPQALTDASTELM-------QSEANL 112
            + +Q++G +  + V  G  V++ Q L  + P      + +    LM       Q+EA L
Sbjct: 63  DVGAQVSGQLKTLSVAIGDKVKKDQLLGVIDPEQAENQIKEVEATLMELRAQRQQAEAEL 122

Query: 113 ESDLQRLANLERLVKQQIIPANYDDYVRAKADVKAKQAEVQQKRQNLELIRSGEASIGQA 172
           +      +  +RL + + +  +  D   A  ++  KQA++         I+  +AS+  A
Sbjct: 123 KLARVTYSRQQRLAQTKAV--SQQDLDTAATEMAVKQAQIGTIDAQ---IKRNQASLDTA 177

Query: 173 KLS---STLYAPISGTILNIKVEVGEPIISTESSQAATEMIQLADMKNIVFKGSVSEHDA 229
           K +   + + AP++G +  I    G+ +I+   +Q A  ++ LADM  ++ K  VSE D 
Sbjct: 178 KTNLDYTRIVAPMAGEVTQITTLQGQTVIA---AQQAPNILTLADMSTMLVKAQVSEADV 234

Query: 230 AQLNAGMPASITVAPYPEQVINGQLTKVAIQSERLNNPENKDGKSFDNGFQVEIGQLDIP 289
             L  G  A  TV   P     GQ+  V    E++N     D   +   F+V        
Sbjct: 235 IHLKPGQKAWFTVLGDPLTRYEGQIKDVLPTPEKVN-----DAIFYYARFEVP------N 283

Query: 290 ENMTLRSGFSASAKITLQRAADVITLPERAL---QFEGETPMVLIADGSAQGYTAHPVKL 346
            N  LR   +A   I L    +V+T+P  AL     +    + L+ +G  +      V +
Sbjct: 284 PNGLLRLDMTAQVHIQLTDVKNVLTIPLSALGDPVGDNRYKVKLLRNGETR---EREVTI 340

Query: 347 GLSDGVQVEILEGVAEKDSIV 367
           G  +   VEI++G+   D +V
Sbjct: 341 GARNDTDVEIVKGLEAGDEVV 361