Pairwise Alignments

Query, 309 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 303 a.a., PCP degradation transcriptional activation protein from Xanthobacter sp. DMC5

 Score =  148 bits (373), Expect = 2e-40
 Identities = 90/286 (31%), Positives = 144/286 (50%), Gaps = 3/286 (1%)

Query: 11  IDLNLLTILEKLLIHKHISQAAQALNMSQPAVSRALMRLREQFGDPLLVKVKNEYRLTAK 70
           +DLNLL  LE LL  +++++AA  L++SQPAVS  L RLR+ F DPLLV  +     T K
Sbjct: 6   LDLNLLVTLEALLAERNVTRAAARLHLSQPAVSAQLARLRDLFDDPLLVPARRGMTPTVK 65

Query: 71  GERLCSELERTLNTIRHMLVDDKFDPMHYSGVFTIGALDFEMMMIVPKLLARFQQRAPNL 130
              L   L   L+ +R  L    FDP       TI   D+    +V  L+   + RAP +
Sbjct: 66  AVELAGPLRAALDQLRATLEARDFDPATADLTVTIACSDYIQAAVVMPLVVALRARAPGV 125

Query: 131 KLQIVPYNAYMPLHDYLEKVADLLLYSTDESPTNVFKQRLFNDNYAVVMCRNHPLANQPI 190
           ++ +      +          DL+L +   +  ++  Q LF + Y ++  R HP   + +
Sbjct: 126 RVAVRHLMPDLIEQQLASGETDLVLTTPRPTQAHLRTQHLFAETYVLIGRRGHPRLRRGL 185

Query: 191 TLESYCQSRHVIIS-GNGLGKTDMDHELKKLNYQREVVASLPHFSMVPELLINTDLIATL 249
           ++E Y +  HVI+S   G  +T +D  L  L ++R VV S   F  +PE++  +D++A +
Sbjct: 186 SIEDYAELEHVIVSPSGGQFRTPVDEGLAALGHRRSVVMSAASFLFIPEIVAASDVVALV 245

Query: 250 PRRLVTHLGQRYEITVADLPFYTADFRVEQFWHLIHHSSPIHQWVR 295
           PRRL+     R  + + +LP+    F V+  WH   H     +W+R
Sbjct: 246 PRRLLRDPPAR--LVMIELPWLAEGFDVDLLWHERTHGHAGQRWLR 289