Pairwise Alignments

Query, 309 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 311 a.a., LysR family transcriptional regulator from Pseudomonas simiae WCS417

 Score =  124 bits (310), Expect = 4e-33
 Identities = 83/305 (27%), Positives = 147/305 (48%), Gaps = 19/305 (6%)

Query: 6   INLRSIDLNLLTILEKLLIHKHISQAAQALNMSQPAVSRALMRLREQFGDPLLVKVKNEY 65
           +NL  +DLNL  + + +    ++++A Q + ++QPAVS AL RLRE F DPL V+     
Sbjct: 1   MNLSKVDLNLFIVFDAIYTEANLTRAGQIVGITQPAVSNALARLRETFNDPLFVRTAQGM 60

Query: 66  RLTAKGERLCSELERTLNTIRHMLVDDK-FDPMHYSGVFTIGALDFEMMMIVPKLLARFQ 124
             T   + +   +   L+ +R  + + + F+P   +  + I   D    +I+P L  R +
Sbjct: 61  VPTPMAQNIIGPVRNALSLLRVSVQESRIFNPQQAAKTYRISMTDLTEAVILPLLFQRLR 120

Query: 125 QRAPNLKLQIVPYNAYMPLHDYLEKVADLLLYSTDESPTNVFKQ----RLFNDNYAVVMC 180
           + AP + ++    +      +  +++A   L    ++P N   Q    +L  D Y   M 
Sbjct: 121 RLAPTVVIE----SFLSKRRETTKELAAGRLDFAVDAPLNTDPQVRHVKLMEDRYVCAMR 176

Query: 181 RNHPLANQ-PITLESYCQSRHVIISG--NGLGKTDMDHELKKLNYQREVVASLPHFSMVP 237
           + HPLA +  +TL+ Y    H+ IS   NGLG  D+   L K+  QR++     H+ M  
Sbjct: 177 KGHPLAGKDKLTLDDYLGLTHIHISSRRNGLGHVDL--ALGKMGLQRKIALRSQHYLMAS 234

Query: 238 ELLINTDLIATLPRRLV-THLGQRYEITVADLPFYTADFRVEQFWHLIHHSSPIHQWVRQ 296
           ++L  TD++ T+P R    H    + + V D+P          +WH      P ++W+R+
Sbjct: 235 QVLQQTDMVMTVPERFARRHELHWFNLPVNDVP----PVETHLYWHESTDQDPANRWMRE 290

Query: 297 EIKNL 301
           ++  L
Sbjct: 291 QMIEL 295