Pairwise Alignments

Query, 309 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 298 a.a., Transcriptional regulator, LysR family from Variovorax sp. SCN45

 Score =  120 bits (302), Expect = 3e-32
 Identities = 78/297 (26%), Positives = 139/297 (46%), Gaps = 6/297 (2%)

Query: 8   LRSIDLNLLTILEKLLIHKHISQAAQALNMSQPAVSRALMRLREQFGDPLLVKVKNEYRL 67
           +  +DL  L + +++    ++S+AA+ L M+Q A S AL +LR  F D L  +     + 
Sbjct: 1   MSKLDLEWLAVFDEVYKTGNVSKAAERLGMAQAAASTALNKLRAHFDDRLFTRTAQGMQP 60

Query: 68  TAKGERLCSELERTLNTIRHMLVD-DKFDPMHYSGVFTIGALDFEMMMIVPKLLARFQQR 126
           T   ER+   L   L  +     +   FDP      F I   D   ++++P LL   +  
Sbjct: 61  TPHAERIYPNLREALAQLAQAQGNRSSFDPAQAQRRFRICMTDISEVVLLPGLLDHLRHA 120

Query: 127 AP--NLKLQIVPYNAYMPLHDYLEKVADLLLYSTDESPTNVFKQRLFNDNYAVVMCRNHP 184
           AP  +++ +I+   +   L D      DL +    +     ++Q LF  N+  +  +NHP
Sbjct: 121 APGVHIETEIISTLSGRRLQD---GEVDLAVGFMPQLDAGFYQQTLFMQNFVCLAAQNHP 177

Query: 185 LANQPITLESYCQSRHVIISGNGLGKTDMDHELKKLNYQREVVASLPHFSMVPELLINTD 244
                +T + +    H ++S +G G   +D  L +L  +R VV  L  F  V  ++ +T+
Sbjct: 178 RIGARLTRKRFEAEAHAVVSTSGTGHAIVDTTLARLGLKRNVVVRLSSFLSVARIVAHTE 237

Query: 245 LIATLPRRLVTHLGQRYEITVADLPFYTADFRVEQFWHLIHHSSPIHQWVRQEIKNL 301
           L+  +PR L   L  +  + + + PF   D+ V+Q WH   H+ P + W+R+ +  L
Sbjct: 238 LLVVVPRILGRVLATQEPVKLLEPPFALPDYAVKQHWHERFHADPGNAWLRRTLAQL 294