Pairwise Alignments

Query, 309 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 311 a.a., Transcriptional regulator, LysR family from Variovorax sp. SCN45

 Score =  118 bits (295), Expect = 2e-31
 Identities = 81/302 (26%), Positives = 146/302 (48%), Gaps = 8/302 (2%)

Query: 7   NLRSIDLNLLTILEKLLIHKHISQAAQALNMSQPAVSRALMRLREQFGDPLLVKVKNEYR 66
           ++RS+D+ +L   + L+  + +S+AA  L +SQPAVS +L RLR+ FGDPL  +      
Sbjct: 5   DIRSLDVGMLRTFDALMRERSVSRAATRLFLSQPAVSASLNRLRDTFGDPLFTRTARGVE 64

Query: 67  LTAKGERLCSELERTLNTIRHML-VDDKFDPMHYSGVFTIGALDFEMMMIVPKLLARFQQ 125
            TA+   L  ++ER L  +  ML   + FDP     +F I   D+   +++P L      
Sbjct: 65  PTARAHALAGQVERVLADLSAMLEPGEGFDPAASQRIFRISGGDYASHLLLPTLANELVA 124

Query: 126 RAPNLKLQIVPYNAYMPLHDYLEK-VADLLLYSTDESPTNVFKQRLFNDNYAVVMCRNHP 184
               +++     ++++ L + L K   D+ +    + P++     L+ D Y V + R HP
Sbjct: 125 CGSRVRI-YWETSSFLTLTERLRKGDFDIAVLPRLQPPSDCESALLYEDRYVVAVRRGHP 183

Query: 185 LANQPITLESYCQSRHVIISGNGLGKTD--MDHELKKLNYQREVVASLPHFSMVPELLIN 242
              +  TL+++C + HV + G G    D  +D  L +L   R +  ++  F  + +LL  
Sbjct: 184 TLGREATLDAFCGAPHVFL-GYGSSALDDLIDQVLARLGRTRTMSVAMTSFGQIVDLLAQ 242

Query: 243 TDLIATLPRRLVTHLGQRYEITVADLPFYTADFRVEQFWHLIHHSSPIHQWVRQEIKNLV 302
           TD +A +P R+      R  + V  LPF    +R    W+   +S     W++  +  + 
Sbjct: 243 TDHVAVMPLRVAERF--RDVLAVHPLPFELQGYRSVVCWNRRSNSDAGVLWLKDALLRIG 300

Query: 303 YE 304
           ++
Sbjct: 301 HQ 302