Pairwise Alignments

Query, 309 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 308 a.a., Transcriptional regulator, LysR family from Pseudomonas putida KT2440

 Score =  133 bits (334), Expect = 6e-36
 Identities = 85/303 (28%), Positives = 146/303 (48%), Gaps = 17/303 (5%)

Query: 6   INLRSIDLNLLTILEKLLIHKHISQAAQALNMSQPAVSRALMRLREQFGDPLLVKVKNEY 65
           +NL  +DLNL  + + +    ++++A Q + ++QPAVS AL RLRE F DPL V+     
Sbjct: 1   MNLSKVDLNLFIVFDAIYTEANLTRAGQIVGITQPAVSNALSRLRETFNDPLFVRTAQGM 60

Query: 66  RLTAKGERLCSELERTLNTIRHMLVDDK-FDPMHYSGVFTIGALDFEMMMIVPKLLARFQ 124
             T   + +   +   L  +R  + + + F+P   +  F I   D    +I+P L  R +
Sbjct: 61  VPTPMAQNIIGPVRNALALLRTSVQESRTFNPQQANKTFRISMTDLTEAVILPPLFQRLR 120

Query: 125 QRAPNLKLQIVPYNAYMPLHDYLEKVADLLLYSTDESPTNVFKQ----RLFNDNYAVVMC 180
           + AP + ++    +      +  +++A   L    ++P N   Q    +L  D Y   + 
Sbjct: 121 RLAPAVMIE----SFLCKRRETTKELAAGRLDFAIDAPLNTDPQVRHIKLMQDRYVCALR 176

Query: 181 RNHPLANQPITLESYCQSRHVIISG--NGLGKTDMDHELKKLNYQREVVASLPHFSMVPE 238
           + HPLA+  +TL+SY    H+ IS   NGLG  D+   L K+  QR+V     H+ M  +
Sbjct: 177 QGHPLADSKLTLDSYLGMTHIHISSRRNGLGYVDL--ALGKMGVQRKVALRSQHYLMASQ 234

Query: 239 LLINTDLIATLPRRLVTHLGQRYEITVADLPFYTADFRVEQFWHLIHHSSPIHQWVRQEI 298
           +L  TD+  T+P R      +R+++    LP          +WH      P ++W+R++I
Sbjct: 235 VLQQTDMAMTVPER----FARRHQLRYQALPVEVPALETHLYWHESTDQDPANRWMREQI 290

Query: 299 KNL 301
             L
Sbjct: 291 TEL 293