Pairwise Alignments

Query, 309 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 307 a.a., Transcriptional regulator, LysR family from Pseudomonas putida KT2440

 Score =  134 bits (336), Expect = 4e-36
 Identities = 89/300 (29%), Positives = 142/300 (47%), Gaps = 6/300 (2%)

Query: 6   INLRSIDLNLLTILEKLLIHKHISQAAQALNMSQPAVSRALMRLREQFGDPLLVKVKNEY 65
           +N+ + DLNLL + + LL  +++S+AA+ L ++QP VS AL RLR+Q GDPLLV+V    
Sbjct: 7   MNISNFDLNLLRVFDMLLREQNVSRAAERLALTQPTVSNALARLRDQLGDPLLVRVGRRM 66

Query: 66  RLTAKGERLCSELERTLNTIRHML-VDDKFDPMHYSGVFTIGALDFEMMMIVPKLLARFQ 124
           R T +   L   +   L  I   L   D F+P        I   DF   + +P LLAR +
Sbjct: 67  RPTPRALALEGPIRAALQQIEQTLGTGDGFEPQRSHRQLRIALTDFVEQLCMPPLLARLE 126

Query: 125 QRAPNLKLQIVPYNAYMPLHDYLEKVADLLLYSTDESPTNVFKQRLFNDNYAVVMCRNHP 184
             APN+++ +V     +P         DL+L   DE P    +     +   + + + HP
Sbjct: 127 LLAPNVRIDVVHLAPNLPAEALDRGDLDLVLGRFDEVPARFTRHPWRRETLQIALRQQHP 186

Query: 185 --LANQPITLESYCQSRHVIISGNGLGKTDMDHELKKLNYQREVVASLPHFSMVPELLIN 242
                Q + L+++   RH+ + G G  +  +D  L +    R++  + P++     L   
Sbjct: 187 HLAPGQALDLDAFLGLRHIWVHG-GQTRGMVDQWLAEQGLTRQIAYTTPNYLQAAHLAAA 245

Query: 243 TDLIATLPRRLVTHLGQRYEITVADLPFYTADFRVEQFWHLIHHS-SPIHQWVRQEIKNL 301
           TD+   LPR+L         + V +LPF    F +E   HL H    P   W+ ++I  L
Sbjct: 246 TDMCVVLPRQLAQQFAHLLPLAVHELPFALEPFELEVV-HLSHRQHDPALAWLVEQILTL 304