Pairwise Alignments

Query, 309 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 308 a.a., PCP degradation transcriptional activation protein from Pseudomonas lactucae CFBP13502

 Score =  150 bits (379), Expect = 4e-41
 Identities = 88/296 (29%), Positives = 149/296 (50%), Gaps = 1/296 (0%)

Query: 8   LRSIDLNLLTILEKLLIHKHISQAAQALNMSQPAVSRALMRLREQFGDPLLVKVKNEYRL 67
           LR+IDLNLL +L+ LL  KH+++    L++SQPA+S +L +LR    DP+L++  NE  L
Sbjct: 6   LRNIDLNLLVVLDALLTEKHVTRTGARLHLSQPAISHSLSKLRVLLDDPILIREGNEVVL 65

Query: 68  TAKGERLCSELERTLNTIRHMLVDD-KFDPMHYSGVFTIGALDFEMMMIVPKLLARFQQR 126
           +A  + + + L   L+ I  +     +FD       F +   D+   +I+PKLL R +  
Sbjct: 66  SAMAQNIQTPLREILSGIETLFGKSIEFDAASSQRTFQLAMSDYGAAIILPKLLVRLRSE 125

Query: 127 APNLKLQIVPYNAYMPLHDYLEKVADLLLYSTDESPTNVFKQRLFNDNYAVVMCRNHPLA 186
           APN  L +   + +       +   DL L       T+V  + LF ++++ ++ R     
Sbjct: 126 APNTTLVVTQGSRHAMFEQVAQGKIDLALGVFPSLTTDVSMEVLFEESFSCLLDRRTLPK 185

Query: 187 NQPITLESYCQSRHVIISGNGLGKTDMDHELKKLNYQREVVASLPHFSMVPELLINTDLI 246
           +  + LESY +  H+ +S +G    ++D  L+    +R +  S+PH+   P LL +TDLI
Sbjct: 186 DGVLDLESYLERPHIQVSMDGGANGEVDSLLRAEGMRRRIAVSVPHWRTAPSLLHHTDLI 245

Query: 247 ATLPRRLVTHLGQRYEITVADLPFYTADFRVEQFWHLIHHSSPIHQWVRQEIKNLV 302
            T+  R +       ++     PF    F   Q WH      P H W+R+++K +V
Sbjct: 246 LTVATRTLEDTLLNPDLVQLSPPFNIPRFPFVQIWHQRFCDDPAHAWLREQVKQVV 301