Pairwise Alignments

Query, 309 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 332 a.a., FIG000557: hypothetical protein co-occurring with RecR from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  162 bits (409), Expect = 1e-44
 Identities = 93/309 (30%), Positives = 150/309 (48%), Gaps = 12/309 (3%)

Query: 2   VAPEINLRSIDLNLLTILEKLLIHKHISQAAQALNMSQPAVSRALMRLREQFGDPLLVKV 61
           V   +N R++DLNLL + ++++  + +++AA  L M+QPAVS AL RLRE  GD L+ + 
Sbjct: 1   VINNLNFRTLDLNLLRVFDEVMTERSLTRAAHNLAMTQPAVSNALRRLREVLGDELVRRS 60

Query: 62  KNEYRLTAKGERLCSELERTLNTIRHMLVDDKFDPMHYSGVFTIGALDFEMMMIVPKLLA 121
                 T     L   +   L+ +R  L    FDP      F +   D     ++P L+ 
Sbjct: 61  GYGVEPTPVALALWPTVRDALHMLRESLAPGTFDPTSARNAFVLAMADATAAKLIPGLMD 120

Query: 122 RFQQRAPNLKLQIVPYNAYMP------------LHDYLEKVADLLLYSTDESPTNVFKQR 169
             +  AP + L+++P     P            +  +   +A+L      E+      QR
Sbjct: 121 LLENEAPGVNLRVLPLTTRDPRGLLESGTVDLAIGHFPGVLAELGAMHLQENDPQFHHQR 180

Query: 170 LFNDNYAVVMCRNHPLANQPITLESYCQSRHVIISGNGLGKTDMDHELKKLNYQREVVAS 229
           L++  Y VVM R HPLA QP++L+SYC +RH+++S +G     +D  L  ++ QR VV +
Sbjct: 181 LYDGEYVVVMRRGHPLAGQPLSLDSYCDARHLLVSFSGRPFGFVDEALAAVSRQRHVVIT 240

Query: 230 LPHFSMVPELLINTDLIATLPRRLVTHLGQRYEITVADLPFYTADFRVEQFWHLIHHSSP 289
           +  F     ++  TDL+  LPR  V   G   E+ + DLP       V+  WH     + 
Sbjct: 241 VNQFFTAGRVVATTDLLTVLPRHFVGATGMEDELALCDLPLQVPAVHVDSLWHRQATQNS 300

Query: 290 IHQWVRQEI 298
            H+W+R  +
Sbjct: 301 AHRWLRDAV 309