Pairwise Alignments

Query, 309 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 310 a.a., transcriptional regulator, MerR family from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  126 bits (317), Expect = 6e-34
 Identities = 87/302 (28%), Positives = 142/302 (47%), Gaps = 6/302 (1%)

Query: 6   INLRSIDLNLLTILEKLLIHKHISQAAQALNMSQPAVSRALMRLREQFGDPLLVKVKNEY 65
           +N R +DLNLL +L  +     ++ A +AL +SQPA S AL RLR+ F D L V+  +  
Sbjct: 1   MNFRQLDLNLLRVLGAIHRTGSVTAAGKALALSQPATSNALARLRDYFKDDLFVRSPSGL 60

Query: 66  RLTAKGERLCSELERTLNTIRHML-VDDKFDPMHYSGVFTIGALDFEMMMIVPKLLARFQ 124
           + T   ERL  E++  L  +  ++ V D FDP      + +   D   MM +P L A  +
Sbjct: 61  QPTRLCERLAPEVQAQLQMLEALVSVRDDFDPARSEMRWRLSLSDLGEMMFLPPLAAALR 120

Query: 125 QRAPNLKLQIVPYNAYMPLHDYLEKVADLLLYSTDESPTNVFKQRLFNDNY-AVVMCRNH 183
           Q+AP   +  V   A         +  D  +         V  + LF ++Y A+   R  
Sbjct: 121 QQAPQAHVTNVSVAAEDVPAALESRDIDFAIGILQPRHRGVRAELLFREHYVALTSSRWR 180

Query: 184 PL---ANQPITLESYCQSRHVIISGNGLGKTDMDHELKKLNYQREVVASLPHFSMVPELL 240
           P    A + ++     ++  V+ S        ++  L ++     +V    HF  +PEL 
Sbjct: 181 PASGPAGRTLSARQLAEASLVVASPTATFHGSVEKMLVRMKLSERIVLRARHFGALPELA 240

Query: 241 INTDLIATLPRRLVTHLGQRYEITVADLPFYTA-DFRVEQFWHLIHHSSPIHQWVRQEIK 299
           +NTDL+  +P+   ++LGQR+++ V +LP   A  + V   WH      P HQW+R ++ 
Sbjct: 241 LNTDLLTIVPQMYASNLGQRHDLRVWELPRAAAPSYEVRLVWHASTAQDPAHQWIRAQVH 300

Query: 300 NL 301
            L
Sbjct: 301 RL 302