Pairwise Alignments

Query, 309 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 337 a.a., PCP degradation transcriptional activation protein from Azospirillum sp. SherDot2

 Score =  123 bits (309), Expect = 5e-33
 Identities = 86/313 (27%), Positives = 150/313 (47%), Gaps = 20/313 (6%)

Query: 6   INLRSIDLNLLTILEKLLIHKHISQAAQALNMSQPAVSRALMRLREQFGDPLLVKVKNEY 65
           + +R +DLNLL + E ++ H+ +  A++ L ++  AVS AL RLR+   D L V   +  
Sbjct: 7   VPIRRLDLNLLRVFEAVMQHRSVIGASRELRITPSAVSHALARLRQSLEDDLFVPGTSGM 66

Query: 66  RLTAKGERLCSELERTLNTIRHMLVDDKFDPMHYSGVFTIGALDFEMMMIVPKLLARFQQ 125
             TA+  +L S +   L  I   +    F P      F I A D+  ++++P+++AR   
Sbjct: 67  EPTARALQLSSGIADGLGRIADAMSTKAFVPSEAVRTFRIAATDYAAVIVLPRIVARIAP 126

Query: 126 RAPNLKLQIVPYNAYMPLHDYLEKVADLLLYSTDESPTNVFKQRLFNDNYAVVMCRNHPL 185
            AP + L++ P N    +    +   D ++    + P  + +  L  ++ AVV+ R HPL
Sbjct: 127 LAPQIDLRVFPVNRMDVVRQLDDGRVDFVIGWFADLPDRMRRTTLLQESEAVVVRRGHPL 186

Query: 186 ANQPITLESYCQSRHVII--SGNGLGKTD--MDHE------------LKKLNYQR----E 225
           A  P+T E   +  HV++  +G+  G TD  +D              L+  +  R     
Sbjct: 187 AAGPVTRERLFEFPHVVVELTGSEEGATDGFIDDRGVSRRVWVERLILEAADSDRGLTGR 246

Query: 226 VVASLPHFSMVPELLINTDLIATLPRRLVTHLGQRYEITVADLPFYTADFRVEQFWHLIH 285
           V  S+PH++ VP LL  +D++ATLPR L     ++  + + DLP+      ++   H   
Sbjct: 247 VAVSVPHYAAVPPLLQVSDMVATLPRLLALRAVEQSGLAILDLPYEPQRVNLDMIRHQRA 306

Query: 286 HSSPIHQWVRQEI 298
              P   W+ ++I
Sbjct: 307 ERDPGACWLIRQI 319