Pairwise Alignments

Query, 309 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 314 a.a., Nodulation protein D 2 from Alteromonas macleodii MIT1002

 Score =  122 bits (307), Expect = 8e-33
 Identities = 81/312 (25%), Positives = 147/312 (47%), Gaps = 15/312 (4%)

Query: 6   INLRSIDLNLLTILEKLLIHKHISQAAQALNMSQPAVSRALMRLREQFGDPLLVKVKNEY 65
           +N+  +DLNLL  L+ LL    +++AA  L+++QPA+S  L RLR+ F DPLLV+  +  
Sbjct: 1   MNIAKVDLNLLVYLDVLLREGSVTKAANQLSITQPAMSNGLKRLRDLFKDPLLVRTSDGM 60

Query: 66  RLTAKGERLCSELERTLNTIRHML-VDDKFDPMHYSGVFTIGALDFEMMMIVPKLLARFQ 124
             T +   L   +   L+ +   +  +  FDP+     F I   D+    ++ +L+ R  
Sbjct: 61  TPTKRALELQPIIRDVLSRLESSIQPETDFDPLTSDRTFRIMTSDYAESTLLLELVGRLA 120

Query: 125 QRAPNLKLQIVPYNAYMPLHDYLEKVADLLLYSTDESPTNVFKQRLFNDNYAVVMCRNHP 184
             APN+ L ++   + +  HD  +   D+ +   +E P +  ++ ++ D ++ VM  +HP
Sbjct: 121 DLAPNITLDLIT-PSDVTFHDVEQGKVDMAINRFEELPLSFHQKVIWYDTFSCVMSSDHP 179

Query: 185 LANQPITLESYCQSRHVIISGNGLGKTD------------MDHELKKLNYQREVVASLPH 232
           L  +   LE Y  ++H+ +S  G G               +D EL K+  QR +     H
Sbjct: 180 LV-EKCNLEGYLSAQHIWVSKTGFGVGVGIDPNEVQKLGWVDAELTKIGKQRAIRVFTRH 238

Query: 233 FSMVPELLINTDLIATLPRRLVTHLGQRYEITVADLPFYTADFRVEQFWHLIHHSSPIHQ 292
           +    ++     LIATLP +         ++ + + PF      ++  W  + H    H 
Sbjct: 239 YHAALQIAKKQKLIATLPSKAARLFKHDPDVVIKEPPFDIPPIALKMAWSALLHHDAGHI 298

Query: 293 WVRQEIKNLVYE 304
           W+R+ I ++  E
Sbjct: 299 WLRRLISDVASE 310