Pairwise Alignments

Query, 309 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 325 a.a., LysR family transcriptional regulator from Agrobacterium fabrum C58

 Score =  130 bits (327), Expect = 4e-35
 Identities = 76/297 (25%), Positives = 142/297 (47%), Gaps = 2/297 (0%)

Query: 1   MVAPEINLRSIDLNLLTILEKLLIHKHISQAAQALNMSQPAVSRALMRLREQFGDPLLVK 60
           ++   +NL  IDLNLL   + L   +++++A   +  +QPA+S AL RLR    D L V+
Sbjct: 3   LIIHPMNLHGIDLNLLVAFDALNSERNVTRAGSRIGRTQPAMSAALSRLRFLLRDELFVR 62

Query: 61  VKNEYRLTAKGERLCSELERTLNTIRHML-VDDKFDPMHYSGVFTIGALDFEMMMIVPKL 119
             N  + T +   L   +   L  I+  L     FDP   +  F+I        +I+P+L
Sbjct: 63  GPNGLQPTPRAVELAEPISLALREIQRTLQFTQGFDPDKSTISFSIAVSAHAGSVILPRL 122

Query: 120 LARFQQRAPNLKLQIVPYNAYMPLHDYLEKVADLLLYSTDESPTN-VFKQRLFNDNYAVV 178
           L+  +++AP + +++  Y++       L+     L      +PT+ +   RLF + +  +
Sbjct: 123 LSLLEEKAPGIDIKVRDYSSRDDAVSLLDSGGVDLTVGIPPTPTSRILSARLFQERFVCI 182

Query: 179 MCRNHPLANQPITLESYCQSRHVIISGNGLGKTDMDHELKKLNYQREVVASLPHFSMVPE 238
           + ++HP+  +P   E++    H++++ +  G    D  L   N++R    ++PH  + P 
Sbjct: 183 LRKDHPILGRPFDPETFLSLTHILVAPDNEGLDVADAALASKNFRRRAAVTIPHMHVAPA 242

Query: 239 LLINTDLIATLPRRLVTHLGQRYEITVADLPFYTADFRVEQFWHLIHHSSPIHQWVR 295
           L+ ++D++AT+   +V H G    + V D P           WH  +   P  QW+R
Sbjct: 243 LVASSDMVATVIESVVAHSGFAERLAVFDFPLPLNPVPFVLSWHRRNDGHPAQQWLR 299