Pairwise Alignments

Query, 309 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 330 a.a., HTH-type transcriptional regulator SyrM 1 from Acinetobacter radioresistens SK82

 Score =  143 bits (360), Expect = 6e-39
 Identities = 90/315 (28%), Positives = 157/315 (49%), Gaps = 15/315 (4%)

Query: 6   INLRSIDLNLLTILEKLLIHKHISQAAQALNMSQPAVSRALMRLREQFGDPLLVKVKNEY 65
           +NL  +DLNLL  L+ LL  K++++AA+ L ++QPA+S  L RLR  F DPLL++     
Sbjct: 1   MNLERVDLNLLIYLDVLLREKNVTRAAEQLGVTQPAMSNILRRLRNLFNDPLLIRSSEGM 60

Query: 66  RLTAKGERLCSELERTLNTIRHMLVD-DKFDPMHYSGVFTIGALDFEMMMIVPKLLARFQ 124
             T +   L   +   L  +  +L    +F P   + VF I   D+    +VP+L+   +
Sbjct: 61  TPTERALELQPRIRDALADLSMILEPRTEFRPYTSNRVFRIMTSDYAEATLVPRLVKALR 120

Query: 125 QRAPNLKLQIVPYNAYMPLHDYLEKVADLLLYSTDESPTNVFKQRLFNDNYAVVMCRNHP 184
             APN+ L  +  +  +   D  +   DL +   +E P +  +  ++ D+Y+ ++   HP
Sbjct: 121 SEAPNVVLDFLTPSD-VSYRDMEQGKVDLAINRFNEIPQSFHQVLVWRDSYSCLLNNKHP 179

Query: 185 LANQPITLESYCQSRHVIISGNGLGKTD------------MDHELKKLNYQREVVASLPH 232
             N  + L+SY  ++H+ +S  G+G               +D  L+++  +R++     H
Sbjct: 180 AMNN-LNLKSYLDAQHIWVSKTGMGVGFGVNPEKQAGLGWIDQALERIGQKRKISVFTRH 238

Query: 233 FSMVPELLINTDLIATLPRRLVTHLGQRYEITVADLPFYTADFRVEQFWHLIHHSSPIHQ 292
           + M   L  N DLIATLP R+     +   + + D PFY  +F ++  W  + H  P H+
Sbjct: 239 YQMPALLAANVDLIATLPTRIARLQAKSQNLIIKDPPFYIPEFELKMAWCPLLHHHPAHR 298

Query: 293 WVRQEIKNLVYEEID 307
           W+RQ I  +  + I+
Sbjct: 299 WLRQLILYVARQMIE 313