Pairwise Alignments

Query, 344 a.a., LacI family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 335 a.a., DNA-binding transcriptional regulator CytR from Vibrio cholerae E7946 ATCC 55056

 Score =  171 bits (432), Expect = 3e-47
 Identities = 109/329 (33%), Positives = 178/329 (54%), Gaps = 1/329 (0%)

Query: 10  MATINDVCKLAGVSKATVSRVLNETGQVKAQTREAVLAAMQQLGYQPNSLAQALATNTTN 69
           MAT+ DV +LAGVS ATVSR L    +V + TR+ V  A+ + GY PNSLA+ L  N + 
Sbjct: 1   MATMKDVAQLAGVSTATVSRALMNPEKVSSSTRKRVEEAVLEAGYSPNSLARNLRRNESK 60

Query: 70  SIGLVLPHFESSYFGSILFEAEQGAQKAGKKLLVMNSKNSEQGEKEAVATLAAQRCDAIL 129
           +I  ++P     YF  I+   E  A + G  +L+ +S   ++ E   V  +  ++ D +L
Sbjct: 61  TIVAIVPDICDPYFSEIIRGIEDAAMEHGYLVLLGDSGQQKRRENSFVNLVFTKQADGML 120

Query: 130 LYSRHLNEVQLLELQQQHPSPLVILNRRLHHPQLHSFGLDQTQIAQLAMQHLLNLGHRQI 189
           L    L    + + +Q++  P+V+        +L +  +D    A  A+ +L  LGH++I
Sbjct: 121 LLGTDL-PFDVSKPEQKNLPPMVMACEFAPELELPTVHIDNLTSAFEAVNYLTQLGHKRI 179

Query: 190 ACITSPLVSETGKIRYQVYQQALHEQGIELSSSLVIEGDNTLLGGYQAMQQLLQQGISMT 249
           A I+ P  +   + R+Q YQQAL   GI ++ +    GD T   G +A++QLL      T
Sbjct: 180 AQISGPQHAALCQFRHQGYQQALRRAGITMNPTYCTFGDFTFEAGAKAVRQLLALPEQPT 239

Query: 250 AVFACNDDMALGAMRAMHEHGIHVPKQVSIIGIDNEPAAAFAIPSLSSVSLPIGELTQQA 309
           A+F  ND MA+GA++     G+ VP+ +S++G D+   A +  P L+++S P  E+ +QA
Sbjct: 240 AIFCHNDTMAIGAIQEAKRLGLRVPQDLSVVGFDDIQFAQYCDPPLTTISQPRYEIGRQA 299

Query: 310 ISLAVEIANKKPQDAQHRLYQGSLIARES 338
           + + +E+       A  RL +  L+ RES
Sbjct: 300 MLMMLELLRGHDVRAGSRLLETKLVVRES 328