Pairwise Alignments
Query, 344 a.a., LacI family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056
Subject, 340 a.a., DNA-binding transcriptional repressor from Pseudomonas putida KT2440
Score = 179 bits (454), Expect = 9e-50
Identities = 114/331 (34%), Positives = 185/331 (55%), Gaps = 3/331 (0%)
Query: 10 MATINDVCKLAGVSKATVSRVLNETGQVKAQTREAVLAAMQQLGYQPNSLAQALATNTTN 69
MATI DV LAG+S TVS VLN+T V Q R V AA+ +L Y P+++A++L +T
Sbjct: 1 MATIKDVAALAGISYTTVSHVLNKTRPVSEQVRLKVEAAIIELDYVPSAVARSLKARSTA 60
Query: 70 SIGLVLPHFESSYFGSILFEAEQGAQKAGKKLLVMNSKNSEQGEKEAVATLAAQRCDAIL 129
+IGL++P+ + YF + E ++ G +++ NS ++ Q ++ + L +R D ++
Sbjct: 61 TIGLLVPNSVNPYFAELARGIEDACERNGYCVILCNSDDNPQKQRSYLRVLLEKRIDGLV 120
Query: 130 LYSRHLNEVQLLELQQQHPSPLVILNRRLHHPQLHSFGLDQTQIAQLAMQHLLNLGHRQI 189
+ S ++ LL+ +P+VI++R L +D Q A LA +HLL LGHR +
Sbjct: 121 VASVGQDD-DLLQSLASVRTPMVIVDRELEGVDADLVRIDHEQGAYLATRHLLELGHRDV 179
Query: 190 ACITSPLVSETGKIRYQVYQQALHEQGIELSSSLVIEGDNTLLGGYQAMQQLLQQGISMT 249
A I P + ++R +++A+ E G + S V+ D T GG+ A Q+L +G +
Sbjct: 180 AYIGGPAETGVTQLRLSGFRRAMAEAGAPVPGSRVLHCDFTSPGGHAAAAQVL-EGKRPS 238
Query: 250 AVFACNDDMALGAMRAMHEHGIHVPKQVSIIGIDNEPAAAFAIPSLSSVSLPIGELTQQA 309
A+FA ND + G +RA E I VP ++S+IG D+ + + PSL++V I EL + A
Sbjct: 239 AIFAGNDMIGFGVLRAAAERNISVPGELSVIGFDDIELSRYVYPSLTTVGQSIRELGESA 298
Query: 310 ISLAV-EIANKKPQDAQHRLYQGSLIAREST 339
SL + IA + A+ R+ ++ REST
Sbjct: 299 ASLLLTRIATPRQGAAEQRIVAPRIVLREST 329