Pairwise Alignments

Query, 344 a.a., LacI family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 344 a.a., LacI family DNA-binding transcriptional regulator from Serratia liquefaciens MT49

 Score =  233 bits (594), Expect = 5e-66
 Identities = 129/334 (38%), Positives = 208/334 (62%), Gaps = 3/334 (0%)

Query: 10  MATINDVCKLAGVSKATVSRVLNETGQVKAQTREAVLAAMQQLGYQPNSLAQALATNTTN 69
           MATI +V K AGVSKATVSRVL+ +G V  + RE V  A+ + GY+PN LA+ LAT TT 
Sbjct: 1   MATILEVAKRAGVSKATVSRVLSGSGYVGPEKRERVEKAIAETGYRPNLLARNLATKTTQ 60

Query: 70  SIGLVLPH--FESSYFGSILFEAEQGAQKAGKKLLVMNSKNSEQGEKEAVATLAAQRCDA 127
           +IGLV+ +  +  +YF  ++F++ +  ++ G++L++ + K++ + EK A+  L   RCD 
Sbjct: 61  TIGLVVTNTLYSGNYFSELMFQSARIMEEHGRQLILADGKHTAEEEKAAIQFLLDLRCDG 120

Query: 128 ILLYSRHLNEVQLLELQQQHPSPLVILNRRLHHPQLHSFGLDQTQIAQLAMQHLLNLGHR 187
           +++Y R L+  ++ E+  QH  P++++NRRL     +    DQ   +  A++HL+  GHR
Sbjct: 121 VIIYPRFLSIAEMDEIISQHKQPILVINRRLRLNDSYCIFSDQHATSAAAVRHLIEQGHR 180

Query: 188 QIACITSPLVSETGKIRYQVYQQALHEQGIELSSSLVIEGDNTLLGGYQAMQQLLQQGIS 247
            IA IT  L S TG  R   Y+ AL EQGI ++S+L++EG      G  A+  L+  G +
Sbjct: 181 DIAFITGSLDSPTGLERLSGYKAALAEQGIAVNSALIVEGKWNAQSGMAAVDTLVASGSA 240

Query: 248 MTAVFACNDDMALGAMRAMHEHGIHVPKQVSIIGIDNEPAAAFAIPSLSSVSLPIGELTQ 307
            +A+ A ND+MA+GA++ + E  I VP  VS+IG D+ P A + IPSLSS+ +P+ ++ +
Sbjct: 241 FSAIVASNDEMAIGAIKRLTERQIPVPSAVSVIGFDDIPLAPYTIPSLSSMKMPVTDMIK 300

Query: 308 QAISLAVEIANKKPQDAQHRLYQGSLIARESTIA 341
           + I+  V + +   + ++   +  SLI R+S  A
Sbjct: 301 ETINRLVSMLD-GGELSKRPTFPASLILRDSVAA 333