Pairwise Alignments

Query, 344 a.a., LacI family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 341 a.a., Transcriptional (co)regulator CytR from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  161 bits (408), Expect = 2e-44
 Identities = 111/332 (33%), Positives = 169/332 (50%), Gaps = 1/332 (0%)

Query: 11  ATINDVCKLAGVSKATVSRVLNETGQVKAQTREAVLAAMQQLGYQPNSLAQALATNTTNS 70
           AT+ DV   A VS ATVSR L    +V   TR  V  A  ++GY P S+ + +  N + +
Sbjct: 10  ATMKDVALKAKVSTATVSRALMNPDKVSQSTRSRVEQAALEVGYFPQSMGRNVKRNESRT 69

Query: 71  IGLVLPHFESSYFGSILFEAEQGAQKAGKKLLVMNSKNSEQGEKEAVATLAAQRCDAILL 130
           I +++P     +F  I+   E  A + G  +L+ +  +  Q EK  +  +  ++ D ++L
Sbjct: 70  ILVIVPDICDPFFSEIIRGIEVTAAEQGYLVLIGDCAHQNQKEKTFLNLIITKQIDGMVL 129

Query: 131 YSRHLNEVQLLELQQQHPSPLVILNRRLHHPQLHSFGLDQTQIAQLAMQHLLNLGHRQIA 190
            S  L     +E Q+  P P+V+ N      +L +  +D    A  AM +LL+LGH++I 
Sbjct: 130 LSSRLPFDASVEEQRNLP-PMVMSNEFAPELELPTVHIDNLTAAFNAMNYLLDLGHKRIG 188

Query: 191 CITSPLVSETGKIRYQVYQQALHEQGIELSSSLVIEGDNTLLGGYQAMQQLLQQGISMTA 250
           CI  P        R Q Y QAL   GI +    +  GD T   G  A++QLL+Q +  TA
Sbjct: 189 CIAGPEDMPLCHYRLQGYVQALRRSGIVVDPHYIARGDFTFEAGANALKQLLEQPLPPTA 248

Query: 251 VFACNDDMALGAMRAMHEHGIHVPKQVSIIGIDNEPAAAFAIPSLSSVSLPIGELTQQAI 310
           VF  +D MALGA+      G+ VP  +SIIG DN   A F  P L++V+ P  ++ ++A+
Sbjct: 249 VFCHSDVMALGALSWAKRQGLKVPDDLSIIGFDNIALAEFCDPPLTTVAQPRFDIGREAM 308

Query: 311 SLAVEIANKKPQDAQHRLYQGSLIARESTIAL 342
            L ++    +   +  RL    LI R ST AL
Sbjct: 309 LLLLDQMQGQNVSSGSRLMDCELIIRGSTRAL 340