Pairwise Alignments

Query, 344 a.a., LacI family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 329 a.a., Ribose operon repressor from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  154 bits (389), Expect = 3e-42
 Identities = 94/305 (30%), Positives = 165/305 (54%), Gaps = 4/305 (1%)

Query: 13  INDVCKLAGVSKATVSRVLNETGQVKAQTREAVLAAMQQLGYQPNSLAQALATNTTNSIG 72
           + DV +LAGVS +TVS V+N+   V     E V AA++ L Y P++LA++L  N T +IG
Sbjct: 1   MKDVARLAGVSTSTVSHVINKDRFVSETITEKVEAAIKSLNYAPSALARSLKLNQTRTIG 60

Query: 73  LVLPHFESSYFGSILFEAEQGAQKAGKKLLVMNSKNSEQGEKEAVATLAAQRCDAILLYS 132
           +++    + ++  ++   E+   + G  L++ N++  EQ     + TL  +R D +LL  
Sbjct: 61  MLITASTNPFYSELVRGVERSCFERGYSLVLCNTEGDEQRMNRNLETLMQKRVDGLLLLC 120

Query: 133 RHLNEVQLLELQQQHPS-PLVILNRRLHHPQLHSFGLDQTQI--AQLAMQHLLNLGHRQI 189
              ++    E+ +++PS P V+++      +  S  +    +    LA Q+L++ G  +I
Sbjct: 121 TETHQPSR-EIMERYPSIPTVMMDWSPFDGEGDSDLIQDNSLLGGDLATQYLIDKGFTRI 179

Query: 190 ACITSPLVSETGKIRYQVYQQALHEQGIELSSSLVIEGDNTLLGGYQAMQQLLQQGISMT 249
           ACIT PL     ++R + Y+ A+   G+ +     I GD    GG+ AMQ LL       
Sbjct: 180 ACITGPLDKTPARLRLEGYRAAMKRAGLAIPQGYEITGDFEFGGGFDAMQALLAHQQRPQ 239

Query: 250 AVFACNDDMALGAMRAMHEHGIHVPKQVSIIGIDNEPAAAFAIPSLSSVSLPIGELTQQA 309
           AVF  ND MA+GA +A+++ G+ +P+ + +IG D+   A +  P L+++  P  EL + A
Sbjct: 240 AVFTGNDAMAVGAYQALYQAGLRIPQDMVVIGYDDIELARYMTPPLTTIHQPKDELGELA 299

Query: 310 ISLAV 314
           I + +
Sbjct: 300 IDVLI 304