Pairwise Alignments

Query, 344 a.a., LacI family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 336 a.a., DNA-binding transcriptional repressor (NCBI) from Escherichia coli BW25113

 Score =  239 bits (609), Expect = 1e-67
 Identities = 128/334 (38%), Positives = 208/334 (62%), Gaps = 3/334 (0%)

Query: 10  MATINDVCKLAGVSKATVSRVLNETGQVKAQTREAVLAAMQQLGYQPNSLAQALATNTTN 69
           M T+ +V K AGVSKATVSRVL+  G V  +T++ V  A+++ GY+PN LA+ L+  +T 
Sbjct: 1   MTTMLEVAKRAGVSKATVSRVLSGNGYVSQETKDRVFQAVEESGYRPNLLARNLSAKSTQ 60

Query: 70  SIGLVLPH--FESSYFGSILFEAEQGAQKAGKKLLVMNSKNSEQGEKEAVATLAAQRCDA 127
           ++GLV+ +  +   YF  +LF A + A++ G++LL+ + K+S + E++A+  L   RCDA
Sbjct: 61  TLGLVVTNTLYHGIYFSELLFHAARMAEEKGRQLLLADGKHSAEEERQAIQYLLDLRCDA 120

Query: 128 ILLYSRHLNEVQLLELQQQHPSPLVILNRRLHHPQLHSFGLDQTQIAQLAMQHLLNLGHR 187
           I++Y R L+  ++ ++   H  P+++LNRRL     HS   D  Q +  A+  L+N GH+
Sbjct: 121 IMIYPRFLSVDEIDDIIDAHSQPIMVLNRRLRKNSSHSVWCDHKQTSFNAVAELINAGHQ 180

Query: 188 QIACITSPLVSETGKIRYQVYQQALHEQGIELSSSLVIEGDNTLLGGYQAMQQLLQQGIS 247
           +IA +T  + S T   R   Y+ AL + GI L+  L+  G  T   G + ++ LL++G  
Sbjct: 181 EIAFLTGSMDSPTSIERLAGYKDALAQHGIALNEKLIANGKWTPASGAEGVEMLLERGAK 240

Query: 248 MTAVFACNDDMALGAMRAMHEHGIHVPKQVSIIGIDNEPAAAFAIPSLSSVSLPIGELTQ 307
            +A+ A NDDMA+GAM+A+HE G+ VP+QVS+IG D+   A + +P+LSSV +P+ E+ Q
Sbjct: 241 FSALVASNDDMAIGAMKALHERGVAVPEQVSVIGFDDIAIAPYTVPALSSVKIPVTEMIQ 300

Query: 308 QAISLAVEIANKKPQDAQHRLYQGSLIARESTIA 341
           + I   + + +     +  + + G LI R+S IA
Sbjct: 301 EIIGRLIFMLD-GGDFSPPKTFSGKLIRRDSLIA 333