Pairwise Alignments

Query, 344 a.a., LacI family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 341 a.a., DNA-binding transcriptional repressor, hypoxanthine-binding (NCBI) from Escherichia coli BW25113

 Score =  179 bits (453), Expect = 1e-49
 Identities = 111/330 (33%), Positives = 181/330 (54%), Gaps = 1/330 (0%)

Query: 10  MATINDVCKLAGVSKATVSRVLNETGQVKAQTREAVLAAMQQLGYQPNSLAQALATNTTN 69
           MATI DV K A VS  TVS V+N+T  V  +TR AV AA+++L Y P+++A++L  N T 
Sbjct: 1   MATIKDVAKRANVSTTTVSHVINKTRFVAEETRNAVWAAIKELHYSPSAVARSLKVNHTK 60

Query: 70  SIGLVLPHFESSYFGSILFEAEQGAQKAGKKLLVMNSKNSEQGEKEAVATLAAQRCDAIL 129
           SIGL+    E++YF  I+   E+   + G  L++ N+ N+ + ++  ++ +A +R D +L
Sbjct: 61  SIGLLATSSEAAYFAEIIEAVEKNCFQKGYTLILGNAWNNLEKQRAYLSMMAQKRVDGLL 120

Query: 130 LYSRHLNEVQLLELQQQHPSPLVILNRRLHHPQLHSFGLDQT-QIAQLAMQHLLNLGHRQ 188
           +      E  L  L++    P+V+++            +D   +   +A ++L+  GHR+
Sbjct: 121 VMCSEYPEPLLAMLEEYRHIPMVVMDWGEAKADFTDAVIDNAFEGGYMAGRYLIERGHRE 180

Query: 189 IACITSPLVSETGKIRYQVYQQALHEQGIELSSSLVIEGDNTLLGGYQAMQQLLQQGISM 248
           I  I  PL   TG  R   + +A+ E  I++  S +++GD     GY+AMQQ+L Q    
Sbjct: 181 IGVIPGPLERNTGAGRLAGFMKAMEEAMIKVPESWIVQGDFEPESGYRAMQQILSQPHRP 240

Query: 249 TAVFACNDDMALGAMRAMHEHGIHVPKQVSIIGIDNEPAAAFAIPSLSSVSLPIGELTQQ 308
           TAVF   D MA+GA+ A  E G+ VP+ VS+IG DN   A +  P+L+++  P   L + 
Sbjct: 241 TAVFCGGDIMAMGALCAADEMGLRVPQDVSLIGYDNVRNARYFTPALTTIHQPKDSLGET 300

Query: 309 AISLAVEIANKKPQDAQHRLYQGSLIARES 338
           A ++ ++    K ++ Q       LI R S
Sbjct: 301 AFNMLLDRIVNKREEPQSIEVHPRLIERRS 330