Pairwise Alignments

Query, 344 a.a., LacI family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 341 a.a., DNA-binding transcriptional regulator CytR from Escherichia coli ECRC62

 Score =  152 bits (384), Expect = 1e-41
 Identities = 107/332 (32%), Positives = 162/332 (48%), Gaps = 1/332 (0%)

Query: 11  ATINDVCKLAGVSKATVSRVLNETGQVKAQTREAVLAAMQQLGYQPNSLAQALATNTTNS 70
           AT+ DV   A VS ATVSR L    +V   TR  V  A +++GY P  + + +  N + +
Sbjct: 10  ATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRT 69

Query: 71  IGLVLPHFESSYFGSILFEAEQGAQKAGKKLLVMNSKNSEQGEKEAVATLAAQRCDAILL 130
           I +++P     +F  I+   E  A   G  +L+ +  +  Q EK  +  +  ++ D +LL
Sbjct: 70  ILVIVPDICDPFFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLL 129

Query: 131 YSRHLNEVQLLELQQQHPSPLVILNRRLHHPQLHSFGLDQTQIAQLAMQHLLNLGHRQIA 190
               L     +E Q+  P P+V+ N      +L +  +D    A  A+ +L   GH++I 
Sbjct: 130 LGSRLPFDASIEEQRNLP-PMVMANEFAPELELPTVHIDNLTAAFDAVNYLYEQGHKRIG 188

Query: 191 CITSPLVSETGKIRYQVYQQALHEQGIELSSSLVIEGDNTLLGGYQAMQQLLQQGISMTA 250
           CI  P        R Q Y QAL   GI +    +  GD T   G +AMQQLL      TA
Sbjct: 189 CIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLLDLPQPPTA 248

Query: 251 VFACNDDMALGAMRAMHEHGIHVPKQVSIIGIDNEPAAAFAIPSLSSVSLPIGELTQQAI 310
           VF  +D MALGA+      G+ VP+ +SIIG DN     F  P L++++ P  E+ ++A+
Sbjct: 249 VFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAM 308

Query: 311 SLAVEIANKKPQDAQHRLYQGSLIARESTIAL 342
            L ++    +   +  RL    LI R ST AL
Sbjct: 309 LLLLDQMQGQHVGSGSRLMDCELIIRGSTRAL 340