Pairwise Alignments

Query, 344 a.a., LacI family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 333 a.a., Galactose operon repressor from Alteromonas macleodii MIT1002

 Score =  195 bits (496), Expect = 1e-54
 Identities = 114/331 (34%), Positives = 188/331 (56%), Gaps = 4/331 (1%)

Query: 10  MATINDVCKLAGVSKATVSRVLNETGQVKAQTREAVLAAMQQLGYQPNSLAQALATNTTN 69
           MATI  V + AGVS ATVSRV+N   +V  +TR+ V  AM  LGYQPN++AQ+LA+N TN
Sbjct: 1   MATIYQVSEAAGVSLATVSRVMNGNAKVSERTRKKVEDAMASLGYQPNAIAQSLASNRTN 60

Query: 70  SIGLVLPHFESSYFGSILFEAEQGAQKAGKKLLVMNSKNSEQGEKEAVATLAAQRCDAIL 129
           S+GL++     SYFG ++   E   ++ GK +++      E+ E EA+  L ++RCDA++
Sbjct: 61  SVGLLVSELHGSYFGDLMSTVEHVLKQNGKHVIITAGHVDEKREHEAIEFLKSRRCDALI 120

Query: 130 LYSRHLNEVQLLELQQQHPSPLVILNRRLHHPQLHSFGLDQTQIAQLAMQHLLNLGHRQI 189
           L++  +++  L  L      P+V++NR++     + F +D  +   +A +  ++ GH++I
Sbjct: 121 LHAEAVSDDYLKTLVDS-KIPVVVINRKVDALDENCFVVDNERGGYMATKAAIDAGHKKI 179

Query: 190 ACITSPLVSETGKIRYQVYQQALHEQGIELSSSLVIEGDNTLLGGYQAMQQLLQQGISMT 249
           A I+ PL  +    R   +++AL E G+    + V EGD     G + MQ L +     T
Sbjct: 180 AYISGPLFKKDASDRLAGHKRALQEAGVTFRENSVFEGDFHESSGQEGMQHLQRTFSDFT 239

Query: 250 AVFACNDDMALGAMRAMHEHGIHVPKQVSIIGIDNEPAAAFAIPSLSSVSLPIGELTQQA 309
           A+   ND+MA GAM A  E G  +P Q+SIIG DN   + +  P L++++ PI  + + A
Sbjct: 240 ALVCANDEMASGAMTAAREAGFDIPSQLSIIGFDNVLFSRYLYPKLTTINNPIHAMGEMA 299

Query: 310 ISLAVEIAN--KKPQDAQHRLYQGSLIARES 338
               ++     K P   +H L++  ++ R++
Sbjct: 300 AYWVLQHVYDIKSPIPIEH-LFEPEVVNRDT 329