Pairwise Alignments

Query, 253 a.a., DeoR/GlpR transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 257 a.a., DNA-bindng transcriptional repressor (NCBI) from Escherichia coli BW25113

 Score = 92.0 bits (227), Expect = 1e-23
 Identities = 71/237 (29%), Positives = 110/237 (46%), Gaps = 4/237 (1%)

Query: 7   RQKQILEYLQQTHGVLSSALLSERFEVSVQTIRKDMNDLSDKGMVRRVHGGISLPSPNDN 66
           RQ  ILEYLQ+  G  S   L++ F+ +  TIRKD+  L   G V R +GG+ L     +
Sbjct: 6   RQAAILEYLQK-QGKCSVEELAQYFDTTGTTIRKDLVILEHAGTVIRTYGGVVLNKEESD 64

Query: 67  LSFSNRDLINLTAKQRIAQRVAQELPEGCSIFLGIGTTPKQVAQALLDHPGLTVVTNNLN 126
               ++ LIN   K+ IA+     + +G SI L  G+T  Q+   L     +TV+TN+L+
Sbjct: 65  PPIDHKTLINTHKKELIAEAAVSFIHDGDSIILDAGSTVLQMVPLLSRFNNITVMTNSLH 124

Query: 127 AALTLSRNPN-INLHLAGGLVRHSDEDTVGEATTRFYRSFNIKVGIFGVGGLNSRGQLLD 185
               LS   N   + + GG  R       G+     +  F       G  G++    +  
Sbjct: 125 IVNALSELDNEQTILMPGGTFRKKSASFHGQLAENAFEHFTFDKLFMGTDGIDLNAGVTT 184

Query: 186 FTPEEANLTRAIIEHSEQCWLVADKSKLERYAPVVSGELSEMHRLFVDKS-TPAFQQ 241
           F  E   +++A+   + +  L+AD SK  R +P V   L  + +L  D    PAF+Q
Sbjct: 185 FN-EVYTVSKAMCNAAREVILMADSSKFGRKSPNVVCSLESVDKLITDAGIDPAFRQ 240