Pairwise Alignments

Query, 253 a.a., DeoR/GlpR transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 255 a.a., DNA-binding transcriptional repressor YgbI from Escherichia coli ECRC62

 Score = 97.4 bits (241), Expect = 2e-25
 Identities = 82/253 (32%), Positives = 114/253 (45%), Gaps = 13/253 (5%)

Query: 3   LLSHRQKQILEYLQQTHGVLSSALLSERFEVSVQTIRKDMNDLSDKGMVRRVHGGISLPS 62
           L+   ++QI+  +    G++S A L++R  VS  TIR+D+  L  +G V  V GG+  P 
Sbjct: 1   LIPVERRQIILEMVAEKGIVSIAELTDRMNVSHMTIRRDLQKLEQQGAVVLVSGGVQSPG 60

Query: 63  P-NDNLSFSNRDLINLTAKQRIAQRVAQELPEGCSIFLGIGTTPKQVAQALLDHPGLTVV 121
                 S   +  + +T K  I +  A  +  G  I+L  GTT   +AQ L+    LTVV
Sbjct: 61  RVAHEPSHQVKTALAMTQKAAIGKLAASLVQPGSCIYLDAGTTTLAIAQHLIHMESLTVV 120

Query: 122 TNNLNAALTLSRNPNINLHLAGGLVRHSDEDTVGEATTRFYRSFNIKVGIFGVGGLNSRG 181
           TN+   A  L  N N  +   GG V   +   VGEA     RS  I          + RG
Sbjct: 121 TNDFVIANYLLDNSNCTIIHTGGAVCRENRSCVGEAAATMLRSLMIDQAFISASSWSVRG 180

Query: 182 QLLDFTPEEANLT--RAIIEHSEQCWLVADKSKLERYAPVVSGELSEMHRLFVDKSTP-- 237
                TP E  +T  RAI   S Q  LV D +K  + A  ++  LSE  ++  D   P  
Sbjct: 181 ---ISTPAEDKVTVKRAIASASRQRVLVCDATKYGQVATWLALPLSEFDQIITDDGLPES 237

Query: 238 -----AFQQLSLL 245
                A Q LSLL
Sbjct: 238 ASRALAKQDLSLL 250