Pairwise Alignments

Query, 253 a.a., DeoR/GlpR transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 258 a.a., Repressor of the acc and arc operons from Agrobacterium fabrum C58

 Score =  107 bits (268), Expect = 2e-28
 Identities = 70/232 (30%), Positives = 121/232 (52%), Gaps = 3/232 (1%)

Query: 7   RQKQILEYLQQTHGVLSSALLSERFEVSVQTIRKDMNDLSDKGMVRRVHGG-ISLPSPND 65
           RQ +I+E L+     L+   L+E F++SV T R+D+++L + G++RR HGG +S+     
Sbjct: 9   RQAKIVELLRDEQ-FLAIGRLTEHFQISVATARRDLSELHEAGLLRRTHGGAVSVTQVTQ 67

Query: 66  NLSFSNRDLINLTAKQRIAQRVAQELPEGCSIFLGIGTTPKQVAQALLDHPGLTVVTNNL 125
           +   + R + N   K  IA  VA  + EG ++ L  GTT  +VA+ L D   LT ++N L
Sbjct: 68  DKPNAARAVWNRAEKAAIAGVVAGMIVEGDTVLLDAGTTALEVAKKLADRRNLTFISNGL 127

Query: 126 NAALTLSRNPNINLHLAGGLVRHSDEDTVGEATTRFYRSFNIKVGIFGVGGLN-SRGQLL 184
           +    L+R    +++  GG    ++    G    +F R FN+   I     ++  RG + 
Sbjct: 128 DIVEELTRGEGKSIYSVGGEYTETNRSFRGPLAEQFIRQFNVDKLILNAASIDVDRGLIC 187

Query: 185 DFTPEEANLTRAIIEHSEQCWLVADKSKLERYAPVVSGELSEMHRLFVDKST 236
             +P  A++ RA+IE S +  +VAD SK  + +  V+  + ++  +  D  T
Sbjct: 188 TSSPVNASVARAMIEVSSRVIVVADHSKFTKSSLSVTARIEDVGVIVTDSGT 239