Pairwise Alignments

Query, 393 a.a., sn-glycerol-3-phosphate import ATP-binding protein UgpC from Vibrio cholerae E7946 ATCC 55056

Subject, 335 a.a., Glycerol-3-phosphate ABC transporter, ATP-binding protein UgpC (TC 3.A.1.1.3) from Variovorax sp. SCN45

 Score =  317 bits (812), Expect = 3e-91
 Identities = 183/359 (50%), Positives = 235/359 (65%), Gaps = 37/359 (10%)

Query: 23  LDIKQLVKTYDNG---HQAVKGVDLSIHQGEFIVLVGPSGCGKSSILRSIAGLESITSGE 79
           L ++ ++K Y +G   +Q + GV   I   EFIV+VGPSGCGKS++LR +AGLE I++GE
Sbjct: 4   LSLRNVIKRYGHGPKANQVIHGVSAEISDHEFIVIVGPSGCGKSTLLRMVAGLEEISAGE 63

Query: 80  IHLAGRRVDNEKPANRDIAMVFQNYALYPHMSVYDNLAYGLKNRGVDKQTIAAKIAKVAK 139
           I +  R V+N +P+ RDIAMVFQNYALYPHM+V+DN+AYGLK   V    I  ++ K AK
Sbjct: 64  ISIGNRVVNNLEPSERDIAMVFQNYALYPHMTVFDNMAYGLKILKVPVAEIKTRVDKAAK 123

Query: 140 TLKIEEYLDRKPAKLSGGQRQRVAMGRAIVRDPQLFLFDEPLSNLDAALRAHMRLEIKKL 199
            L++   L RKP +LSGGQRQRVAMGRAIVR PQ+FLFDEPLSNLDA LRA  RLEI+KL
Sbjct: 124 ILELGHLLARKPRELSGGQRQRVAMGRAIVRQPQVFLFDEPLSNLDAKLRAQTRLEIQKL 183

Query: 200 QRELGVTSVYVTHDQVEAMTLADRIVVVKQGEIEQVGTPAEVYHQPASTFVASFIGSPAM 259
            RELG+TS++VTHDQVEAMTLA RI+V+  G ++Q  TP EVY++PA+TFVASFIGSP M
Sbjct: 184 HRELGITSLFVTHDQVEAMTLAQRIIVMNGGVMDQFATPEEVYNRPATTFVASFIGSPPM 243

Query: 260 NFL--PASIKQGQLHIAGKHCYLPQFDAMSSENITLGIRPEHASLHPLTNAIELKLDIQV 317
           N L     ++ GQ+                     LGIRPEH  L      ++    ++ 
Sbjct: 244 NLLKHAPGVRPGQI---------------------LGIRPEHMKLDESGWTVQ----VEQ 278

Query: 318 VEPLGPNQLVHGKIIGLESEQDFIAVTAE--IPLDVHQTLPIWVALEQLHLFDQ-QGKR 373
           VE LG  +LV+G+I     ++  I  T E   P     T+ I    ++LH FD   GKR
Sbjct: 279 VELLGAERLVYGRI----GDEQIIMRTDEGDHPPVTGDTVKIAAREDKLHWFDAGSGKR 333