Pairwise Alignments

Query, 280 a.a., sn-glycerol-3-phosphate ABC transporter permease UgpE from Vibrio cholerae E7946 ATCC 55056

Subject, 281 a.a., glucose/xylose ABC transporter, permease component 1 (from data) from Pseudomonas simiae WCS417

 Score =  105 bits (263), Expect = 8e-28
 Identities = 74/275 (26%), Positives = 132/275 (48%), Gaps = 16/275 (5%)

Query: 4   NRLSDHLILIAGALFMLVPLWLIFASSTHQPNTIVSEGL-QWTLGDNLSAVYREAWNKSL 62
           +R++ + +LI   L  LVPL ++  +S   P  I S  L  W      + V    W K+ 
Sbjct: 13  SRIAIYAVLILAVLLYLVPLVVMLLTSFKTPEDISSGNLLSWP-----TVVTGIGWVKAW 67

Query: 63  GFAGNVTAQTMIVNSMIMGLGFAIGKIVISMMAAYALVYFRLPYASAWFWLIFITLLLPL 122
                 T      NS+ + +   +    I  +  Y L ++R   +  +F L+     LP 
Sbjct: 68  A-----TVDGYFWNSIKITVPAVLISTAIGALNGYVLSFWRFKGSQLFFGLLLFGCFLPF 122

Query: 123 EVRIIPSYEVVSNLGMLNSYTGLVLPLIASATA--TFFFRQFFKTIPDELLEAAQLDNAG 180
           +  ++P+   +  +G+ ++ TGLV   +    A  T FFR ++ +IPD L++AA+LD AG
Sbjct: 123 QTVLLPASFTLGKMGLASTTTGLVFVHVVYGLAFTTLFFRNYYVSIPDALIKAARLDGAG 182

Query: 181 PIRFFIDILFPLSKTMMAAIFIIMFVVGWNQYLWPIMMTTDEQYNTIVMGIKQILNNINE 240
               F  I+ P+S  ++    I  F   WN +L+ ++ ++ +    I + +  ++N    
Sbjct: 183 FFTIFRQIILPMSTPIIMVCLIWQFTQIWNDFLFGVVFSSGDS-QPITVALNNLVN--TS 239

Query: 241 TSLPRYDYAFAMVILAMLPPVLVVVIFQRWFVKGL 275
           T    Y+   A  ++A LP +LV VI  ++FV+GL
Sbjct: 240 TGAKEYNVDMAAAMIAGLPTLLVYVIAGKYFVRGL 274