Pairwise Alignments

Query, 280 a.a., sn-glycerol-3-phosphate ABC transporter permease UgpE from Vibrio cholerae E7946 ATCC 55056

Subject, 283 a.a., carbohydrate ABC transporter permease from Variovorax sp. OAS795

 Score = 86.7 bits (213), Expect = 5e-22
 Identities = 67/270 (24%), Positives = 125/270 (46%), Gaps = 14/270 (5%)

Query: 10  LILIAGALFMLVPLW--LIFASSTHQPNTIVSEGLQWTLGDNLSAVYREAWNKSLGFAGN 67
           LI I   L+ LVP++  ++FA S+    T    G  W     L   +R  + +   +  +
Sbjct: 17  LIGIPVLLWTLVPVYHMVLFAISSKDSAT---SGHLWPKNPTLDN-FRIVFQQKHFYLDH 72

Query: 68  VTAQTMIVNSMIMGLGFAIGKIVISMMAAYALVYFRLPYASAWFWLIFITLLLPLEVRII 127
              Q  + NS+++ +      + ++  AA+A+   R+        L   T  +P     +
Sbjct: 73  FWLQ--LWNSLLIAVSVGAITLFVATTAAFAISRLRVRGGRTVMNLALFTYFIPAAFLAV 130

Query: 128 PSYEVVSNLGMLNSYTGLVLPL--IASATATFFFRQFFKTIPDELLEAAQLDNAGPIRFF 185
           P Y+ + N G+LNS   L+L +  IAS    +  +Q    +P EL EAA++D A P++ F
Sbjct: 131 PMYKTMGNYGLLNSQWALILAMVTIASPYCIWVLKQASDKLPYELDEAARMDGASPLQLF 190

Query: 186 IDILFPLSKTMMAAIFIIMFVVGWNQYLWPIMMTTDEQYNTIVMGIKQILNNINETSLPR 245
             +  PL    + A+     ++ WN+YL+  ++ ++++  T+ +     L N        
Sbjct: 191 RLVYLPLMVPSLVAVGTYSLLLAWNEYLYAFLLLSNDRSVTLAVA----LGNFLSADDSP 246

Query: 246 YDYAFAMVILAMLPPVLVVVIFQRWFVKGL 275
           ++   A  ++  LPP  +   F+R+ V GL
Sbjct: 247 WELLMATGLIYALPPAAIYYAFKRYMVGGL 276