Pairwise Alignments

Query, 280 a.a., sn-glycerol-3-phosphate ABC transporter permease UgpE from Vibrio cholerae E7946 ATCC 55056

Subject, 285 a.a., carbohydrate ABC transporter permease from Paraburkholderia sabiae LMG 24235

 Score =  108 bits (271), Expect = 1e-28
 Identities = 79/284 (27%), Positives = 137/284 (48%), Gaps = 19/284 (6%)

Query: 1   MKSNRLSDHLILIAGALFMLVPLWLIFASSTH-----QPNTIVSEGLQWTLGDNLSAVYR 55
           M  +R   +  LI  AL+ L PL+++ ++S       +   +++    WT      A + 
Sbjct: 5   MNFSRAVIYAALILFALYFLFPLYVMLSTSFKDIDQLRTGNLLTPPTHWTF-----APWV 59

Query: 56  EAWNKSLGFAGNVTAQTMIVNSMIMGLGFAIGKIVISMMAAYALVYFRLPYASAWFWLIF 115
           +AW+++         +   +NS+ M +   +   +I     Y L ++R   A A F ++ 
Sbjct: 60  KAWSQACTGVRCDGMEPFFMNSVKMVIPAVLISSIIGAFNGYVLTHWRFRGADALFTMLL 119

Query: 116 ITLLLPLEVRIIPSYEVVSNLGMLNSYTGLVLPLIASATA--TFFFRQFFKTIPDELLEA 173
           +   +P +  ++P   +    G+ N+  GLVL  +    A  T FFR F+ ++P EL++A
Sbjct: 120 VGCFIPFQAILLPMARLQGFFGLSNTIGGLVLVHVVYGIAFTTMFFRNFYVSVPAELVKA 179

Query: 174 AQLDNAGPIRFFIDILFPLSKTMMAAIFIIMFVVGWNQYLWPIMMTTDEQYNTIVMGIKQ 233
           A++D AG    F  I+ P+S  +     I  F   WN +L+ I+ +  +      M I  
Sbjct: 180 ARIDGAGFFMIFTKIMMPISLPIFMVCLIWQFTQIWNDFLFGIVFSGVDS-----MPITV 234

Query: 234 ILNNINETS--LPRYDYAFAMVILAMLPPVLVVVIFQRWFVKGL 275
            LNN+  TS  +  Y+   A  I+A LP +LV VI  R+FV+GL
Sbjct: 235 ALNNLVNTSTGVKEYNVDMAGAIIAALPTLLVYVIAGRYFVRGL 278