Pairwise Alignments

Query, 280 a.a., sn-glycerol-3-phosphate ABC transporter permease UgpE from Vibrio cholerae E7946 ATCC 55056

Subject, 297 a.a., carbohydrate ABC transporter permease from Dickeya dianthicola ME23

 Score =  102 bits (254), Expect = 1e-26
 Identities = 64/270 (23%), Positives = 128/270 (47%), Gaps = 8/270 (2%)

Query: 9   HLILIAGALFMLVPLWLIFASSTHQPNTIVSEGLQWTLGDNLSAVYREAWNKSLGFAGNV 68
           HL+L+   L M+ P   + + +    + I    LQ        + +   W ++       
Sbjct: 32  HLLLMVSGLLMVFPFVWMLSGALKTNDEIFRHPLQLLPSHPDFSSFATVWRET------- 84

Query: 69  TAQTMIVNSMIMGLGFAIGKIVISMMAAYALVYFRLPYASAWFWLIFITLLLPLEVRIIP 128
                + NS+ + L  ++  +V S++ AYA+V +R       + ++    +LP  V  IP
Sbjct: 85  HFGLFMYNSLTVALLTSLLVVVNSVLFAYAIVQWRGKAGRLLYGVVMACYMLPGAVTYIP 144

Query: 129 SYEVVSNLGMLNSYTGLVLPLIASATATFFFRQFFKTIPDELLEAAQLDNAGPIRFFIDI 188
            Y +++ L +L+++ GL+     SA   F+  Q  K I   L+EAA++D AG       I
Sbjct: 145 CYIILAKLHVLDTHIGLIFSNAVSAMGVFYLHQALKKIHPSLMEAARIDGAGEWALLRTI 204

Query: 189 LFPLSKTMMAAIFIIMFVVGWNQYLWPIMMTTDEQYNTIVMGIKQILNNINETSLPRYDY 248
           + P  K ++A +F+++F+  +N Y+WP ++ T    N I +GI+Q   +  +     +  
Sbjct: 205 VLPQIKPVLATLFLLIFITHYNSYMWPSLVITSPSLNLISIGIRQYFISGGDYGF-NWSN 263

Query: 249 AFAMVILAMLPPVLVVVIFQRWFVKGLVES 278
             A   + ++P + + ++ QR  + G  ++
Sbjct: 264 IMAASAIVVMPMLFLFLLCQRMILSGFSDN 293