Pairwise Alignments

Query, 280 a.a., sn-glycerol-3-phosphate ABC transporter permease UgpE from Vibrio cholerae E7946 ATCC 55056

Subject, 300 a.a., carbohydrate ABC transporter permease from Dickeya dianthicola ME23

 Score =  102 bits (255), Expect = 8e-27
 Identities = 73/279 (26%), Positives = 135/279 (48%), Gaps = 24/279 (8%)

Query: 9   HLILIAGALFMLVPLWLIFASSTHQPNTIVSEGLQWTLGDNLSAVYREAWNKSLGFAGNV 68
           ++IL+A  + ML PL  +F++S    + I +    W             W+   GF    
Sbjct: 33  YIILLAVGILMLYPLAWMFSASFKPNHEIFTTLSLWPT--------HATWD---GFINGW 81

Query: 69  TAQTM--IVNSMIMGLGFAIGKIVISMMA----AYALVYFRLPYASAWFWLIFITLLLPL 122
              T     + MI    + I K+ +++++    AY    F +P+ + WF  +  T+LLP 
Sbjct: 82  KTGTEYNFGHYMINTFKYVIPKVALTVISSTIVAYGFARFEIPWKNFWFATLIATMLLPS 141

Query: 123 EVRIIPSYEVVSNLGMLNSYTGLVLPLIASATATFF---FRQFFKTIPDELLEAAQLDNA 179
            V +IP Y +   +GMLNSY  L +P +A AT  FF     QF + +P ++ EAAQ+D  
Sbjct: 142 TVLLIPQYIMFREMGMLNSYLPLYVP-VAFATQGFFVFMLIQFLRGVPRDMEEAAQIDGC 200

Query: 180 GPIRFFIDILFPLSKTMMAAIFIIMFVVGWNQYLWPIMMTTDEQYNTIVMGIKQILNNIN 239
              +    ++ P+ K  + ++ +  F+   N ++ P++         I + +K    +I+
Sbjct: 201 NSWQVLWYVVVPILKPAIISVALFQFMWSMNDFIGPLIYVYSVDKYPIALALKM---SID 257

Query: 240 ETSLPRYDYAFAMVILAMLPPVLVVVIFQRWFVKGLVES 278
            T    ++   AM  +++LP +++  + QR+FV+G+  S
Sbjct: 258 VTEGAPWNEILAMASISILPSIIIFFMAQRYFVQGVTSS 296