Pairwise Alignments

Query, 280 a.a., sn-glycerol-3-phosphate ABC transporter permease UgpE from Vibrio cholerae E7946 ATCC 55056

Subject, 271 a.a., carbohydrate ABC transporter permease from Dickeya dianthicola ME23

 Score =  103 bits (258), Expect = 3e-27
 Identities = 55/205 (26%), Positives = 112/205 (54%), Gaps = 6/205 (2%)

Query: 75  VNSMIMGLGFAIGKIVISMMAAYALVYFRLPYASAWFWLIFITLLLPLEVRIIPSYEVVS 134
           +NS+++ +   I  +++ +++ +   + R+P    +   + + ++LP E  IIP Y  + 
Sbjct: 67  MNSILVVVPVVISSLLLGILSGFGFAFLRIPGKRLFAAALALGMVLPSEAFIIPLYHELH 126

Query: 135 NLGMLNSYTGLVLPLIASAT--ATFFFRQFFKTIPDELLEAAQLDNAGPIRFFIDILFPL 192
            LG+ NSY  L+LP +A +   AT      F+ +P ELLEA+ +D A  ++    IL P 
Sbjct: 127 WLGLTNSYLALILPQVALSMPFATLMIASAFQQVPRELLEASVMDGAPRLKILWGILVPA 186

Query: 193 SKTMMAAIFIIMFVVGWNQYLWPIMMTTDEQYNTIVMGIKQILNNINETSLPRYDYAFAM 252
              M++ + +++F+  WN++L P+++   ++  T+ +G+     N N  ++P      A 
Sbjct: 187 IWPMLSTLALLLFIWTWNEFLIPLILVNRDELRTLPIGM-MFFQNKNTINIP---VLMAG 242

Query: 253 VILAMLPPVLVVVIFQRWFVKGLVE 277
            ++ +LP + + + FQR F+ G+ E
Sbjct: 243 AMIVILPLIAIFLCFQRKFISGVTE 267



 Score = 22.7 bits (47), Expect = 0.009
 Identities = 11/31 (35%), Positives = 20/31 (64%)

Query: 11  ILIAGALFMLVPLWLIFASSTHQPNTIVSEG 41
           +L+AGA+ +++PL  IF     +  + V+EG
Sbjct: 238 VLMAGAMIVILPLIAIFLCFQRKFISGVTEG 268