Pairwise Alignments

Query, 280 a.a., sn-glycerol-3-phosphate ABC transporter permease UgpE from Vibrio cholerae E7946 ATCC 55056

Subject, 272 a.a., carbohydrate ABC transporter permease from Dickeya dadantii 3937

 Score =  121 bits (303), Expect = 2e-32
 Identities = 83/290 (28%), Positives = 145/290 (50%), Gaps = 38/290 (13%)

Query: 1   MKSNRLSDHLILIAGAL--FMLVPLWLIFASSTHQPNTIVSEGLQWTLGDNLSAVYREAW 58
           MK + L    I+I   L  F+L P+W IF+++    + I                   AW
Sbjct: 1   MKGSSLLTRWIIIGFMLLFFLLPPIW-IFSNALKSVDEIF------------------AW 41

Query: 59  NKSLGFAGNVTAQTMIV------------NSMIMGLGFAIGKIVISMMAAYALVYFRLPY 106
             SL +  NVT +  +             NS  + +  ++  + IS+MA YAL  FR   
Sbjct: 42  PPSL-WPQNVTLENFVDVFVNTNFVHTLGNSFFVSVLSSLLSVTISVMAGYALAKFRFRG 100

Query: 107 ASAWFWLIFITLLLPLEVRIIPSYEVVSNLGMLNSYTGLVLPLIASATATFFFRQFFKTI 166
            +  F +I   L++PL++ +IP + ++ +L +LN+  G+++   A+ T  F  RQ+ + I
Sbjct: 101 DTLVFMVIMCALMIPLQIILIPIFLLLRDLHLLNTLWGVIIAPAATPTGVFLMRQYIRNI 160

Query: 167 PDELLEAAQLDNAGPIRFFIDILFPLSKTMMAAIFIIMFVVGWNQYLWPIMMTTDEQYNT 226
           PD LLEAA+L+  G  R    I+ PLS   +A +    FV  WN +LWP ++ +D+   T
Sbjct: 161 PDSLLEAARLEGTGEWRILWRIVVPLSLPAIATLAAFTFVWRWNDFLWPFLVISDQSQWT 220

Query: 227 IVMGIKQILNNINETSLPRYDYAFAMVILAMLPPVLVVVIFQRWFVKGLV 276
           + +    + +N+ +  +  +    AM  +A+LP + + +  QR+F+ GL+
Sbjct: 221 VQLA---LASNVGQFDI-NWPRLLAMSAMAVLPMLAIFLALQRYFMNGLM 266