Pairwise Alignments

Query, 280 a.a., sn-glycerol-3-phosphate ABC transporter permease UgpE from Vibrio cholerae E7946 ATCC 55056

Subject, 293 a.a., ABC transporter membrane spanning protein (sugar) from Agrobacterium fabrum C58

 Score =  110 bits (275), Expect = 4e-29
 Identities = 75/284 (26%), Positives = 141/284 (49%), Gaps = 19/284 (6%)

Query: 6   LSDHLILIAGALFMLVPLWLIFASSTHQPNTIVSEGLQWTLGDNLSAVYREAWNKSLGFA 65
           + ++++++A A   ++PL  +  SS    + ++S+    ++   L   Y    N +  F 
Sbjct: 14  IGNYVLMLAFAAIFILPLLFMGFSSLKPNDQLLSDAT--SIRAFLPVGYLSLENYTAAFV 71

Query: 66  GNVTAQTMIVNSMIMGLGFAIGKIVISMMAAYALVYFRLPYASAWFWLIFITLLLPLEVR 125
               A T I NS+++ +      ++   +AA+A  +         F +I  TL++P E  
Sbjct: 72  RAPIA-TFIFNSVLVTVVTVFLALLFGSLAAFAFTFLNWRGKDVLFSIILATLIIPFETI 130

Query: 126 IIPSYEVVSNL----------GMLNSYTGLVLPLIASATATFFFRQFFKTIPDELLEAAQ 175
            +P    V+NL          G LNS+   ++P IA     F F Q+FK +P ELLEAA+
Sbjct: 131 AVPLLLEVNNLPWIGSGGFTWGWLNSWHVQIIPWIADGLTIFLFVQYFKDLPKELLEAAR 190

Query: 176 LDNAGPIRFFIDILFPLSKTMMAAIFIIMFVVGWN-QYLWPIMMTTDEQYNTIVMGIKQI 234
           +D A  +R +  ++ PLS  ++A   I+ F+V ++ QYLWP+++T  E Y  +++G++  
Sbjct: 191 IDGASWLRIYTQVVMPLSGPVIATAAILKFLVMYSQQYLWPLLVTQSEAYRPVMVGLQYF 250

Query: 235 LNNINETSLPRYDYAFAMVILAMLPPVLVVVIFQRWFVKGLVES 278
                + + P +    A + +  LP ++  +  QR F+  +  S
Sbjct: 251 F----QLNTP-WGEVMAYLTIITLPVLIFYLCLQRLFISSIAAS 289