Pairwise Alignments

Query, 280 a.a., sn-glycerol-3-phosphate ABC transporter permease UgpE from Vibrio cholerae E7946 ATCC 55056

Subject, 292 a.a., ABC transporter membrane spanning protein (sugar) from Agrobacterium fabrum C58

 Score = 93.6 bits (231), Expect = 5e-24
 Identities = 69/273 (25%), Positives = 129/273 (47%), Gaps = 20/273 (7%)

Query: 9   HLILIAGALFMLVPLWLIFASSTHQPNTIVSEGLQWTLGDNLSAVYR--EAWNKSLGFAG 66
           H+  I   L  L P+ L+  +S  +P  + S GL    G       R  +     L +AG
Sbjct: 28  HITCILVGLLFLAPIVLVLLAS-FRPPAMASSGLFSVQGLGFGNYGRLEDFGAGILHYAG 86

Query: 67  NVTAQTMIVNSMIMGLGFAIGKIVISMMAAYALVYFRLPYASAWFWLIFITLLLPLEVRI 126
           N         S+ + L  A   I++S+ A Y    FR P+    F LI  T+++P +  +
Sbjct: 87  N---------SLFVALATAAFTILVSVFAGYGFSRFRFPFKLVAFVLILSTIMVPFQSIL 137

Query: 127 IPSYEVVSNLGMLNSYTGLVLPLIASAT--ATFFFRQFFKTIPDELLEAAQLDNAGPIRF 184
            P + ++  LG+ N+ +GLV   +      + F  R  F  +P E+ EAA++D    +R 
Sbjct: 138 TPLFLILPKLGLQNTLSGLVFIYVTLQLPFSIFMMRNAFDAVPKEIEEAARIDGVKGLRA 197

Query: 185 FIDILFPLSKTMMAAIFIIMFVVGWNQYLWPIMMTTDEQYNTIVMGIKQILNNINETSLP 244
            + +L PL    + ++ +  F+  WN++L  +++ TD+   T+ +    ++  +      
Sbjct: 198 LVYVLGPLVFPGIVSVGLFAFLNAWNEFLGALVLLTDQDRYTLPV----LVTAVRSGRYG 253

Query: 245 RYDYAF--AMVILAMLPPVLVVVIFQRWFVKGL 275
             D+    A V + M+P +++ V  QR++++GL
Sbjct: 254 SIDWGAVQAGVTVMMIPCLILFVTLQRFYIRGL 286