Pairwise Alignments

Query, 280 a.a., sn-glycerol-3-phosphate ABC transporter permease UgpE from Vibrio cholerae E7946 ATCC 55056

Subject, 269 a.a., ABC transporter membrane spanning protein (glycerol-3-phosphate) from Agrobacterium fabrum C58

 Score =  120 bits (301), Expect = 3e-32
 Identities = 79/272 (29%), Positives = 139/272 (51%), Gaps = 13/272 (4%)

Query: 4   NRLSDHLILIAGALFMLVPLWLIFASSTHQPNTIVSEGLQWTLGDNLSAVYREAWNKSLG 63
           N L   L L+AG LF+   L+ I+ S          E L +TL +   AV +  + + L 
Sbjct: 5   NPLLAGLALVAGLLFLSPVLYSIWMSFQTVDAYYAGE-LGFTLDNYARAVGQYNFARYL- 62

Query: 64  FAGNVTAQTMIVNSMIMGLGFAIGKIVISMMAAYALVYFRLPYASAWFWLIFITLLLPLE 123
                   ++IV++M+  LG     I  + MAAYA   +        F     TL++P  
Sbjct: 63  ------LNSLIVSAMVTLLG-----ITFATMAAYAFARYSFKGGDFLFAATVATLMIPSH 111

Query: 124 VRIIPSYEVVSNLGMLNSYTGLVLPLIASATATFFFRQFFKTIPDELLEAAQLDNAGPIR 183
           + +IP+Y  ++ +G+L+SY GL+LP I++  A FF RQ+ + IP  L EAA +D A  ++
Sbjct: 112 ISLIPNYLTLAKVGLLDSYAGLILPAISNGFAAFFLRQYIRGIPKALDEAAYMDGATSLQ 171

Query: 184 FFIDILFPLSKTMMAAIFIIMFVVGWNQYLWPIMMTTDEQYNTIVMGIKQILNNINETSL 243
               I+ PLS+  +A++ + +F+  WN Y+WP++    +   T+ +G+ ++        L
Sbjct: 172 VLWRIIVPLSRPAIASMALYIFMTEWNNYIWPLVAVGKQDMYTLQIGLARLYRINPGEGL 231

Query: 244 PRYDYAFAMVILAMLPPVLVVVIFQRWFVKGL 275
             +    A   + +LP +L  ++ +R  V+G+
Sbjct: 232 IDWPLVMAASTITILPVLLGFLLVERHLVRGI 263