Pairwise Alignments

Query, 280 a.a., sn-glycerol-3-phosphate ABC transporter permease UgpE from Vibrio cholerae E7946 ATCC 55056

Subject, 285 a.a., sugar ABC transporter permease from Agrobacterium fabrum C58

 Score = 94.0 bits (232), Expect = 3e-24
 Identities = 70/267 (26%), Positives = 124/267 (46%), Gaps = 16/267 (5%)

Query: 11  ILIAGALFMLVPLWLIFASSTHQPNTIVSEGLQWTLGDNLSAVYREAWNKSLGFAGNVTA 70
           IL+   LF  +  W++F S   +    V   + W       A Y +A++           
Sbjct: 26  ILLVNGLFPAI--WILFTSLKTEAELTVKP-ITWFPHAPTLANYMQAFSDQ-------PL 75

Query: 71  QTMIVNSMIMGLGFAIGKIVISMMAAYALVYFRLPYASAWFWLIFITLLLPLEVRIIPSY 130
              + NS ++ L      I+IS++AAYAL    L Y +    LI      PL   ++P +
Sbjct: 76  HLFLFNSFMVALLSTALTILISVLAAYALARLNLKYRALILSLIIAVSTFPLVTLLVPLF 135

Query: 131 EVVSNLGMLNSYTGLVLP--LIASATATFFFRQFFKTIPDELLEAAQLDNAGPIRFFIDI 188
           E++  L +LNS+T L+LP  +++    T     FF++IP +L  AA +D    I     +
Sbjct: 136 EIMRALNLLNSWTALILPYTVLSLPVCTLMLVSFFESIPRDLENAAMIDGCTRIGALFKV 195

Query: 189 LFPLSKTMMAAIFIIMFVVGWNQYLWPIMMTTDEQYNTIVMGIKQILNNINETSLPRYDY 248
           + PL    +    I+ FV  W+++L  +   ++    T+ +GI+       E + P +  
Sbjct: 196 VVPLCAPGVFTAGILAFVNAWDEFLLALSFNSNPALRTLPVGIQLYQ---GEFAFP-WPV 251

Query: 249 AFAMVILAMLPPVLVVVIFQRWFVKGL 275
             A +++ ++P  +++VIFQ   V GL
Sbjct: 252 ISAALVVGIVPVAILIVIFQERVVSGL 278