Pairwise Alignments

Query, 280 a.a., sn-glycerol-3-phosphate ABC transporter permease UgpE from Vibrio cholerae E7946 ATCC 55056

Subject, 278 a.a., sugar ABC transporter permease from Agrobacterium fabrum C58

 Score =  105 bits (262), Expect = 1e-27
 Identities = 72/276 (26%), Positives = 132/276 (47%), Gaps = 20/276 (7%)

Query: 5   RLSDHLILIAGALFMLVPLWLIFASSTHQPNTIVSEGLQWTLGDNLSAVYREAWNKSLGF 64
           +++ H  L   A+  L PLW++F  ST     I S  +      N            +  
Sbjct: 12  KMALHATLTPLAIIWLFPLWMMFVFSTMPDYGIFSPDIVLVPSTNF-----------MEN 60

Query: 65  AGNVTAQTMIVNSMIMGLGFAIGKIVISM----MAAYALVYFRLPYASAWFWLIFITLLL 120
             N+ A T  + +M + +  A+   V+S+    MA +AL  +R         +I  T+ L
Sbjct: 61  LSNLQADTNFLRAMFISITVAVIYTVLSVFLTSMAGWALARYRFAGRRVVIAIILGTITL 120

Query: 121 PLEVRIIPSYEVVSN-LGMLNSYTGLVLPLIASATATFFFRQFFKTIPDELLEAAQLDNA 179
           P  V +IP + +V+    + N++  L++P + ++    F RQ F  +P EL +AA+++  
Sbjct: 121 PFAVVVIPQFIMVAREFKLANTWIALIVPPLFNSLGVLFMRQSFSMMPTELFDAARVEGV 180

Query: 180 GPIRFFIDILFPLSKTMMAAIFIIMFVVGWNQYLWPIMMTTDEQYNTIVMGIKQILNNIN 239
              + F+ I  PL++  MAA+ II+F+  WN YLWP+++ +     T  + +  ++  + 
Sbjct: 181 KEWQIFLRIALPLARPTMAALSIILFLASWNNYLWPLLINSRPGMMTAPVALGTLI-GLT 239

Query: 240 ETSLPRYDYAFAMVILAMLPPVLVVVIFQRWFVKGL 275
           + S   +    A  +L   P ++V V  QR F+ G+
Sbjct: 240 KVS---WGGIMAGAVLLTAPILVVFVALQRHFIAGI 272