Pairwise Alignments

Query, 293 a.a., glycerol-3-phosphate transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 313 a.a., Inner membrane ABC transporter permease protein YcjO from Xanthobacter sp. DMC5

 Score =  104 bits (260), Expect = 2e-27
 Identities = 72/277 (25%), Positives = 136/277 (49%), Gaps = 5/277 (1%)

Query: 17  LAPQIVIIAVFFIYPAAQAIYLSFMLEDPWGLSSTFVWFENYQVLFSSTDYLDSLGFTLL 76
           + P  V +  F  YP    ++L F  +   G    F+  ENYQ L+  + +   +  TLL
Sbjct: 31  MVPAAVFLLFFLTYPLGLGVWLGFT-DTRIGREGVFIGLENYQSLWGDSLFWLVVFNTLL 89

Query: 77  FSVIVSFLSLALALLLAVKADNIIHGQGSYRVTLTWVYAVAPAVAGIIGGFLFNPHIGVL 136
           +++  S L  AL L LA+  +  +  +  +R  +   + V   ++ I   ++F+    ++
Sbjct: 90  YTIAASILKFALGLWLALLLNENLPFKAFFRAVVLLPWVVPTVLSAIAFWWIFDSQYSII 149

Query: 137 TDFFQYIGW---QFSFQTDPVDATIALILVSVWKQVSVNFLYFLAGLQSISYAVREAALL 193
           +     +G      +F  D  +A  ++I  +VW+ +    +  LAGLQ+IS ++ EAA L
Sbjct: 150 SWALIKMGLISAPINFLGDVTNARASVIAANVWRGIPFVAISLLAGLQTISPSLHEAATL 209

Query: 194 DCQSDSKRFWSITFPLLAPTGFFLLVINLTYAFFDTFGVIDTMTNGGPGGSTTSLVYKVY 253
           D  ++ +RF  IT P+L+P    ++  ++ + F D F +I  +T GGP  ST  +    +
Sbjct: 210 DGATNWQRFRYITLPMLSPIIAVVMTFSVLFTFTD-FQLIYVLTRGGPLNSTHLMATLSF 268

Query: 254 RDGFVGADLGGSSAQSVVLLVLVLALTWLQFRFVEKR 290
           +    G  LG  +A +V ++  +LA     +  +++R
Sbjct: 269 QRAIPGGSLGEGAAIAVAMIPFLLAAILFSYFGLQRR 305