Pairwise Alignments

Query, 293 a.a., glycerol-3-phosphate transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 286 a.a., Inner membrane ABC transporter permease protein YcjO from Xanthobacter sp. DMC5

 Score = 97.4 bits (241), Expect = 3e-25
 Identities = 73/275 (26%), Positives = 128/275 (46%), Gaps = 6/275 (2%)

Query: 14  YLLLAPQIVIIAVFFIYPAAQAIYLSFMLEDPWGLSSTFVWFENYQVLFSSTDYLDSL-- 71
           Y  L   + + A+  + P   A+ LSF   D +  +  +   +NY  + S   +  +L  
Sbjct: 8   YSFLFLGLAVTALLIVAPVVYAVSLSFYQMDSFVGAPKWAGLDNYTRMLSQWVFWRALIN 67

Query: 72  GFTLLFSVIVSFLSLALALLLAVKADNIIHGQGSYRVTLTWVYAVAPAVAGIIGGFLFNP 131
           GF   F  I+    + L +  A+  + +  G+   R      Y +   V  +   ++ + 
Sbjct: 68  GFIYSFGTII--FQVVLGIGFALVLNQVFPGRNIVRGLSILPYLLPTVVVVLTFKWMVDG 125

Query: 132 HIGVLTDFFQYIGW-QFSFQTDPVDATIALILVSVWKQVSVNFLYFLAGLQSISYAVREA 190
            IGVLT     +G  Q  +   P  A  ++ILVSVW         FLA LQ++  ++ EA
Sbjct: 126 SIGVLTTMMSALGLPQVQWFESPGAAMASVILVSVWMWTPFVTTTFLAALQTVPSSLYEA 185

Query: 191 ALLDCQSDSKRFWSITFPLLAPTGFFLLVINLTYAFFDTFGVIDTMTNGGPGGSTTSLVY 250
           A +D  +  +RF+ IT P+L P    ++++   +  F+ F VI  +T GGP G+T  L  
Sbjct: 186 AKVDGTNAVQRFFHITLPMLKPILTVIVLLRAVW-MFNKFDVIWLLTQGGPVGATEHLAI 244

Query: 251 KVYRDGFVGADLGGSSAQSVVLLVLVLALTWLQFR 285
             Y+  F   D+GG +A + +   ++  + ++ FR
Sbjct: 245 LSYKQAFGQFDIGGGAAVATISFAILSLVVFIYFR 279