Pairwise Alignments

Query, 293 a.a., glycerol-3-phosphate transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 302 a.a., glucose/xylose ABC transporter, permease component 2 (from data) from Pseudomonas simiae WCS417

 Score = 96.7 bits (239), Expect = 6e-25
 Identities = 73/272 (26%), Positives = 125/272 (45%), Gaps = 8/272 (2%)

Query: 12  LPYLLLAPQIVIIAVFFIYPAAQAIYLSFMLEDPWGLSSTFVW--FENYQVLFSSTDYLD 69
           LP L+LAP + I+ V F         LSF          T+ W     Y  LF +  +  
Sbjct: 20  LPKLVLAPSMFIVLVGFYGYILWTFVLSFTNST---FLPTYKWAGLAQYARLFDNDRWWV 76

Query: 70  SLGFTLLFSVIVSFLSLALALLLAVKADNIIHGQGSYRVTLTWVYAVAPAVAGIIGGFLF 129
           +     +F  +   ++L + + LA+  D  I  +G  R    +  A++  V G    +L 
Sbjct: 77  ASKNLAVFGGMFIGITLVIGVTLAIFLDQKIRREGFIRTIYLYPMALSMIVTGTAWKWLL 136

Query: 130 NPHIGV--LTDFFQYIGWQFSFQTDPVDATIALILVSVWKQVSVNFLYFLAGLQSISYAV 187
           NP +G+  L   + + G++  +  DP      L++ +VW+        FLAGL+ +  ++
Sbjct: 137 NPGMGLDKLLRDWGWEGFRLDWLIDPDRVVYCLVIAAVWQASGFIMAMFLAGLRGVDQSI 196

Query: 188 REAALLDCQSDSKRFWSITFPLLAPTGFFLLVINLTYAFFDTFGVIDTMTNGGPGGSTTS 247
             AA +D  S  + +WS+  P L P  FF  V+ L +    +F ++  MT GGPG S+  
Sbjct: 197 VRAAQIDGASMPRIYWSVVLPSLRPV-FFSAVMILAHIAIKSFDLVAAMTAGGPGYSSDL 255

Query: 248 LVYKVYRDGFVGADLGGSSAQSVVLLVLVLAL 279
               +Y   F    +G  SA ++++L  +LA+
Sbjct: 256 PAMFMYSFTFSRGQMGMGSASAILMLGAILAI 287