Pairwise Alignments

Query, 293 a.a., glycerol-3-phosphate transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 302 a.a., sugar ABC transporter permease from Erwinia tracheiphila SCR3

 Score =  106 bits (264), Expect = 7e-28
 Identities = 83/286 (29%), Positives = 139/286 (48%), Gaps = 17/286 (5%)

Query: 14  YLLLAPQIVIIAVFFIYPAAQAIYLSF----MLEDPWGLSSTFVWFENYQVLFSSTDYLD 69
           ++LLAP ++++ +   +P  + I LSF    ++ +  G +  ++  ENY    +  D+L 
Sbjct: 13  WVLLAPMLLMMGLLTTWPLLRTIRLSFTDAALISN--GGTINYIGVENYLYALTDPDFLS 70

Query: 70  SLGFTLLFSVIVSFLSLALALLLAVKADNIIHGQGSYRVTLTWVYAVAPAVAGIIGGFLF 129
           SL  TL F+V    L   + +L+A+  +   +G+   RV +   +A+   V  ++    F
Sbjct: 71  SLLRTLYFTVTSVALEGIIGVLVALLLNQKFYGRSVLRVLVILPWALPTIVNAMMWRLNF 130

Query: 130 NPHIGVLTDFFQYIGWQFSFQT---DPVDATIALILVSVWKQVSVNFLYFLAGLQSISYA 186
           NP  G +      +G   ++++    P  A  A+++  VWK   +  L  LA LQSI   
Sbjct: 131 NPDYGSINALLTQLGIIGNYRSWLGSPDSALNAVMVADVWKNYPLVTLLVLAALQSIPDH 190

Query: 187 VREAALLDCQSDSKRFWSITFPLLAPTGFFLLVINLTYAFFDTFGVIDTMTNGGPGGSTT 246
           + EAA+LD  S   RF +I FP +       LV+  T   F  F VI  MT GGP  ST 
Sbjct: 191 LFEAAMLDGASALHRFRAIIFPAIVGPLSVALVLR-TIDAFKVFDVIYVMTRGGPVDSTK 249

Query: 247 SLVYKVYRDGFVGADLGGSSAQSV-------VLLVLVLALTWLQFR 285
           +L + VY++ F     G  +A ++       VL+ + + + W Q R
Sbjct: 250 TLSFYVYQESFSYLRAGSGAAYAILMTLMCSVLIAVYMTMVWRQRR 295