Pairwise Alignments

Query, 293 a.a., glycerol-3-phosphate transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 322 a.a., sugar ABC transporter permease from Agrobacterium fabrum C58

 Score =  115 bits (289), Expect = 1e-30
 Identities = 94/300 (31%), Positives = 146/300 (48%), Gaps = 21/300 (7%)

Query: 9   HTPLPYLLLAPQIVIIAVFFIYPAAQAIYLSFMLEDPWGLSST-FVWFENYQVLFSSTDY 67
           H  + ++ L P +++ AVF   P A  +  S    +   LS    V  EN+ VL S  +Y
Sbjct: 25  HRRIAWVFLTPNLILFAVFAFLPIALNMAYSVTGSEHILLSERPSVGGENFSVLLSCQNY 84

Query: 68  LD-----------SLGFTLLFSVIVSFLSLALALLLAVKADNIIHGQGSYRVTLTWVYAV 116
           LD           S+  TL F V+     +  +L+ AV  +  I  +G +R    +   +
Sbjct: 85  LDPNSCQRDLFWRSVWNTLFFVVLQVGFMVGFSLITAVVLNRDIRARGFFRAVFFFPVLL 144

Query: 117 APAVAGIIGGFLFNPHIGVLTDFFQYIGWQFSFQTDPVDATIAL---ILVSVWKQVSVNF 173
           +P V  +I  ++     GVL    + +G         ++A +A    + +SVW  +    
Sbjct: 145 SPVVVALIWKWILQ-RFGVLNAAMEGLG--LGSVDWLLEANLAFGWSVFLSVWAHMGFYT 201

Query: 174 LYFLAGLQSISYAVREAALLDCQSDSKRFWSITFPLLAPTGFFLLVINLTYAFFDTFGVI 233
           L  LAGLQ+I   V EAA LD  S  + F  IT PLLAPT   +LV++L      TF  +
Sbjct: 202 LILLAGLQAIPRDVYEAAQLDKASPWRIFRRITLPLLAPTMLVVLVLSLIKG-VQTFDEV 260

Query: 234 DTMTNGGPGGSTTSLVYKVYRDGFVGA--DLGGSSAQSVVLLVLVLALTWLQFRFVEKRV 291
              T GGPG +TT ++  +Y+ GF G   + G ++A S++L V+++ LT LQFR    +V
Sbjct: 261 FAFTGGGPGSATTFIIQFIYQTGFAGTPRNFGLAAAASLLLAVVLVVLTALQFRANRSKV 320