Pairwise Alignments

Query, 293 a.a., glycerol-3-phosphate transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 293 a.a., sugar ABC transporter permease from Agrobacterium fabrum C58

 Score = 96.3 bits (238), Expect = 7e-25
 Identities = 90/302 (29%), Positives = 136/302 (45%), Gaps = 51/302 (16%)

Query: 17  LAPQIVIIAVFFIYPAAQAIYLSF----MLEDPWGLSSTFVWFENYQVLFS-STDYLDSL 71
           L P IV + VF   P   ++YLSF    ++ DP     T+    NY+ LF+    ++ SL
Sbjct: 12  LTPYIVGLLVFTAIPFLGSLYLSFTRYDLMSDP-----TWAGLANYERLFTRDRTFMKSL 66

Query: 72  GFTLLFSVIVSFLSLALALLLAVKADNIIHGQGSYRVTLTWVYAVAPAVAGIIGGFLFNP 131
             TL +  +   L LA AL +A   +        Y++     +  A  V  I+GG +   
Sbjct: 67  NVTLFYVFLTVPLKLAFALFIAAILN--------YKLQFINFFRTAFYVPSILGGSIA-- 116

Query: 132 HIGVLTDFFQYIGWQFSFQT--------------------DPVDATIALILVSVWKQVSV 171
            I VL        W++ F +                    DP +A   + L+  W Q   
Sbjct: 117 -IAVL--------WRYIFASEGLANMALAAIGLSPVDWFGDPGNALFTITLLRCW-QFGS 166

Query: 172 NFLYFLAGLQSISYAVREAALLDCQSDSKRFWSITFPLLAPTGFFLLVINLTYAFFDTFG 231
             + FLA LQSI  ++ EAA +D     K F+ IT PLL P  FF L++ +  AF +  G
Sbjct: 167 AMVIFLAALQSIDKSLYEAAAIDGAGKVKTFFFITLPLLTPVIFFNLIMQMVQAFQEFNG 226

Query: 232 VIDTMTNGGPGGSTTSLVYKVYRDGFVGADLGGSSAQSVVLLVLVLALTWLQFRFVEKRV 291
               +T GGP  ST  L   +Y + F   ++G +SA + VL  ++  LT + F   +K V
Sbjct: 227 PY-IITQGGPLKSTYLLPLYIYDEAFKKFNMGYASAIAWVLFTIITVLTLVAFWSSKKWV 285

Query: 292 HY 293
           +Y
Sbjct: 286 YY 287