Pairwise Alignments

Query, 293 a.a., glycerol-3-phosphate transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 292 a.a., sugar ABC transporter permease from Agrobacterium fabrum C58

 Score =  106 bits (265), Expect = 5e-28
 Identities = 80/277 (28%), Positives = 139/277 (50%), Gaps = 4/277 (1%)

Query: 16  LLAPQIVIIAVFFIYPAAQAIYLSFMLEDPWGLSSTFVWFENYQVLFSSTDYLDSLGFTL 75
           ++ P IV+ A FF+YP  + + +SF  + P      +V F NY  L S   ++ SL    
Sbjct: 15  MVTPFIVVFATFFLYPLIEMVRISFT-DAPLIGEGNWVGFANYTKLLSDRLFVTSLKNNG 73

Query: 76  LFSVIVSFLSLALALLLAVKADNIIHGQGSYRVTLTWVYAVAP-AVAGIIGGFLFNPHIG 134
            F ++    +  +AL +A+    +   + +  ++L ++  V P +V   I  ++ +   G
Sbjct: 74  YFVLLTVVPTTVIALTIALAVSRLSGVKQTIAMSLFFLPYVLPVSVVTEIWAWMLDLQFG 133

Query: 135 VLTDFFQYI-GWQFSFQTDPVDATIALILVSVWKQVSVNFLYFLAGLQSISYAVREAALL 193
           +L      I G   +   +P      + +V++W     N L F+AGL++I   + EAA L
Sbjct: 134 ILQPVISLIAGKPVAVFKNPYWVMPMVAVVTIWWTNGFNVLLFIAGLRNIPTELYEAASL 193

Query: 194 DCQSDSKRFWSITFPLLAPTGFFLLVINLTYAFFDTFGVIDTMTNGGPGGSTTSLVYKVY 253
           D  +  +RFW +T+PLL P    +L + L       F  I  ++ GGP  S+  L+ KVY
Sbjct: 194 DGATTWQRFWRVTWPLLWPVTALVLTLQLILQ-LKIFDQIYLLSGGGPFNSSFVLLLKVY 252

Query: 254 RDGFVGADLGGSSAQSVVLLVLVLALTWLQFRFVEKR 290
           R+ F   + G +SA S VL +L++ ++ LQF+ +  R
Sbjct: 253 REAFQLNNGGYASAVSTVLFLLIVIVSILQFQLLRIR 289