Pairwise Alignments

Query, 434 a.a., ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 437 a.a., Glycerol-3-phosphate ABC transporter, substrate-binding protein UgpB from Variovorax sp. SCN45

 Score =  328 bits (840), Expect = 3e-94
 Identities = 170/410 (41%), Positives = 241/410 (58%), Gaps = 5/410 (1%)

Query: 24  AATEITWWHAMGGQLGETVNQLATDFNASQSDYKLTPVYKGSYTETLTAGIAAFRAGQAP 83
           A TEI WWH+M G L + VN LA  FN SQ DYK+   YKG Y +++ AGIAAFRAG AP
Sbjct: 24  AQTEIQWWHSMDGALNDWVNDLAKQFNESQKDYKVVATYKGEYDQSMAAGIAAFRAGNAP 83

Query: 84  NILQVFDAGAATIMSSKGVAKPVQDLMIESGYPFTAQDYIAGVRNFYADNTGKMVGMPFN 143
           +ILQVF+ G AT+M SKG  KPV D+M E G  F  + YI  V  +Y    G+M+  PFN
Sbjct: 84  DILQVFEVGTATMMYSKGAIKPVADVMKEGGQKFDPKAYIPAVAGYYTAPNGQMLSFPFN 143

Query: 144 SSTPVLYYNKDMLASVN---AQAPQTYEQLEQVAAKLAEKG-QAGFAQSLTPWIMFENFK 199
           SST V YYNKD   +      +AP T+ ++   AAKL   G Q  F  S   W   E+F 
Sbjct: 144 SSTTVFYYNKDAFKTAGLDPEKAPATWPEVVAAAAKLKASGSQCPFTTSWMSWAQLESFS 203

Query: 200 SRHNLPLSDKQNGYQDLSTKIMFNSDDMLMHVKKLKEWSDKGYYKYYGSDWDANQTPFER 259
           + HN   + K NG+  L  ++ FNS   + H + L   + +G + Y G       T F  
Sbjct: 204 AWHNTSYATKNNGFGGLDARLEFNSPLHVRHFENLSNMAKQGLFVYKGRA-SKPITSFTS 262

Query: 260 GEVAMWMGSSGSFGGLRNRVKFNLGTTYLPYWESVTKNPTHTFIGGAALFALQGHTPAQD 319
           GE AM++GSSGS+  ++   KF    + LPY+  V   P +T +GGA+L+ + G   A  
Sbjct: 263 GECAMFIGSSGSYASVKRDAKFKFAESALPYYPDVQGAPQNTIVGGASLWVMSGKPAANY 322

Query: 320 KGVAAFFAYLTKPETQMNWHKTTGYVPVTNAAYDLTKQSGYYQENPDAEVGVKQLSLPDG 379
           KGVAAFF++L+ P+ Q   H  TGY+P+T A+Y+LT+++G+Y+ENP  +V V Q+     
Sbjct: 323 KGVAAFFSFLSSPKVQSESHMRTGYLPITMASYELTEKTGFYKENPGTDVAVNQMIKKTT 382

Query: 380 EWTKGYRLGYYPQVREVMHREFDNIFSGRSTVESSLNKVEDESAKLLNRF 429
           + ++G RLG  PQ+R +   E + I++G+ T + +L+       +LL +F
Sbjct: 383 DKSRGVRLGNLPQIRAIEDEETELIWTGKKTPKEALDSAVKRGNELLVKF 432