Pairwise Alignments

Query, 434 a.a., ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 410 a.a., sugar ABC transporter substrate-binding protein from Paraburkholderia sabiae LMG 24235

 Score = 47.8 bits (112), Expect = 6e-10
 Identities = 56/222 (25%), Positives = 87/222 (39%), Gaps = 19/222 (8%)

Query: 135 GKMVGMPFNSSTPVLYYNKDMLASVN-AQAPQTYEQLEQVAAKLAEKGQAGFAQSLTPWI 193
           GK  G+P  +S   LYYNKD+LASV     P+T+  +   + KL  KG AGF       +
Sbjct: 133 GKTYGLPIAASARALYYNKDLLASVGYPNGPKTWNDVIDASKKLKAKGVAGFG------L 186

Query: 194 MFENFKSRHNLPLSDKQNGYQDLST--KIMFNSDDMLMHVKKLKEWSDKGYYK--YYGSD 249
             +  ++      +   NG   L+   K  F+S   +      K   D+G  +    G  
Sbjct: 187 QGKEIETDVYYYYALWTNGGDVLNKEGKAGFDSPAGIKAATLYKSMIDQGLTQQGVTGYS 246

Query: 250 WDANQTPFERGEVAMWMGSSGSFGGLRNRV-KFNLGTTYLPYWESVTKNPTHTFIGGAAL 308
            +  Q  F++G VAM + +      ++        G   LP     T   T+       +
Sbjct: 247 REDVQNLFKQGRVAMMISAPFLAKQIKKEAPNLKYGIDPLPVG---TTGATYAVTDSIVM 303

Query: 309 FALQGHTPAQDKGVAAFFAYLTKPETQMNWHKTTGYVPVTNA 350
           F          K    F  YL   E ++ +  T G++P T A
Sbjct: 304 F----KNSKVKKDAWKFLDYLFTKEPRVEFTSTEGFLPTTKA 341