Pairwise Alignments

Query, 434 a.a., ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 438 a.a., Glycerol-3-phosphate ABC transporter, periplasmic glycerol-3-phosphate-binding protein (TC 3.A.1.1.3) from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  334 bits (856), Expect = 4e-96
 Identities = 169/420 (40%), Positives = 248/420 (59%), Gaps = 8/420 (1%)

Query: 18  FSASTLAATEITWWHAMGGQLGETVNQLATDFNASQSDYKLTPVYKGSYTETLTAGIAAF 77
           F+   LA T I +WH+M G+LG+ V+ LA  FN +  DYK+ PVYKG+Y + L+AGIAAF
Sbjct: 17  FTGQALAVTTIPFWHSMEGELGKEVDSLAQRFNQANPDYKIVPVYKGNYEQNLSAGIAAF 76

Query: 78  RAGQAPNILQVFDAGAATIMSSKGVAKPVQDLMIESGYPFTAQDYIAGVRNFYAD-NTGK 136
           R G AP ILQV++ G AT+M+SK + KPV ++  ++G  F    ++  V  +Y D  +G 
Sbjct: 77  RTGNAPAILQVYEVGTATMMASKAI-KPVYEVFKDAGINFDESQFVPTVAGYYTDAKSGH 135

Query: 137 MVGMPFNSSTPVLYYNKDMLASVNA---QAPQTYEQLEQVAAKLAEKG-QAGFAQSLTPW 192
           ++  PFNSSTPVLYYNKD          Q P+T+++L    AKL   G + G+A     W
Sbjct: 136 LLSQPFNSSTPVLYYNKDAFKKAGLDPEQPPKTWQELADYTAKLRAAGMKCGYASGWQGW 195

Query: 193 IMFENFKSRHNLPLSDKQNGYQDLSTKIMFNSDDMLMHVKKLKEWSDKGYYKYYGSDWDA 252
           I  ENF + + LP + K NG+      + FN  + + H+  L+E + KG + Y G   D 
Sbjct: 196 IQLENFSAWNGLPFASKNNGFDGTDAVLEFNKPEQVKHIALLEEMNKKGDFSYVGRK-DE 254

Query: 253 NQTPFERGEVAMWMGSSGSFGGLRNRVKFNLGTTYLPYWESVTKNPTHTFIGGAALFALQ 312
           +   F  G+ AM   SSGS   +R   KFN G   +PY   +   P +  IGGA+L+ +Q
Sbjct: 255 STEKFYNGDCAMTTASSGSLANIRQYAKFNYGVGMMPYDADIKGAPQNAIIGGASLWVMQ 314

Query: 313 GHTPAQDKGVAAFFAYLTKPETQMNWHKTTGYVPVTNAAYDLTKQSGYYQENPDAEVGVK 372
           G       GVA F  +L KPE    WH+ TGY+P+T AAY+LT++ GYY +NP A++  +
Sbjct: 315 GKDKETYTGVAKFLDFLAKPENAAEWHQKTGYLPITTAAYELTREQGYYDKNPGADIATR 374

Query: 373 Q-LSLPDGEWTKGYRLGYYPQVREVMHREFDNIFSGRSTVESSLNKVEDESAKLLNRFAR 431
           Q L+ P   +TKG RLG  PQ+R ++  E +++++G+ T + +L+   D   +LL RF +
Sbjct: 375 QMLNKPPLPFTKGLRLGNMPQIRTIVDEELESVWTGKKTPQQALDTAVDRGNQLLRRFEK 434